Escherichia coli 118UI |
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Putative Escherichia coli 118UI RM systems
Ref: Luna-Pineda,V.M. et al. unpublished
REBASE ref # 27576
Complete sequence: 5,205,677 bp
GenBank #: CP032515
REBASE acronym: Eco118U1
Org_num: 31331
All begin Eco118UI_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25800 | endoribonuclease SymE | |||
| 25805 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco118U1ORF25810P |
| 25810 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco118U1ORF25810P |
| 25815 | R | EcoEC0589ORF3020P (100% identity) | AACNNNNNNGTGC | Eco118U1ORF25810P |
| 25820 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6695 | recombination protein NinB | |||
| 6700 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco118U1ORF6700P |
| 6705 | NinE family protein | |||
| 11560 | drug/metabolite exporter YedA | |||
| 11565 | V | V.Fnu048DcmP (100% identity) | V.Eco118U1DcmP | |
| 11570 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.Eco118U1DcmP |
| 11575 | phosphohydrolase | |||
| 13880 | 131 aa hypothetical protein | |||
| 13885 | M | M2.EcoC0216ORF14390P (100% identity) | M.Eco118U1ORF13885P | |
| 13890 | TrmB family transcriptional regulator | |||
| 13895 | antitermination protein | |||
| 13900 | M | M1.EcoC0216ORF14390P (100% identity) | M.Eco118U1ORF13900P | |
| 13905 | NinG family protein | |||
| 14945 | PerC family transcriptional regulator | |||
| 14950 | M | M.EcoZ151ORF6750P (100% identity) | M.Eco118U1ORF14950P | |
| 14955 | DUF1382 family protein | |||
| 19600 | Fis family transcriptional regulator | |||
| 19605 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco118U1ORF19605P |
| 19610 | DUF2556 domain-containing protein | |||
| 20150 | ribulose-phosphate 3-epimerase | |||
| 20155 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco118U1DamP |
| 20160 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25790 | R | SenHNK130McrCP (100% identity) | Eco118U1McrCP | |
| 25795 | R | SenHNK130McrBP (100% identity) | Eco118U1McrBP | |
| 25800 | endoribonuclease SymE | |||
| 25815 | type I restriction-modification system | |||
| 25820 | R | Ssp28760MrrP (100% identity) | Eco118U1MrrP | |
| 25825 | GTPase | |||