Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-SA20132913 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-SA20132913 RM systems
Ref: Duceppe,M.-O. et al. unpublished
REBASE ref # 27136
Contig set: 4,888,563 bp
GenBank #: PYVD00000000 (NZ_PYVD00000000)
REBASE acronym: Sen913
Org_num: 31145
All begin C5I08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23655 | endoribonuclease SymE | |||
| 23660 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen913ORF23665P |
| 23665 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen913ORF23665P |
| 23670 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen913ORF23665P |
| 23675 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10490 | RusA family crossover junction | |||
| 10495 | M | M.Sen461ORF10455P (100% identity) | GATC | M.Sen913ORF10495P |
| 10500 | PerC family transcriptional regulator | |||
| 18300 | ribulose-phosphate 3-epimerase | |||
| 18305 | M | M.StyTDamP (100% identity) | GATC | M.Sen913DamP |
| 18310 | cell division protein DamX | |||
| 24565 | 62 aa hypothetical protein | |||
| 24570 | M | M.SenBR045ORFCP (100% identity) | M.Sen913ORF24570P | |
| 24575 | 73 aa hypothetical protein | |||
| 10235 | drug/metabolite exporter YedA | |||
| 10240 | V | V.StyUK1DcmP (100% identity) | V.Sen913DcmP | |
| 10245 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen913DcmP |
| 10250 | phosphohydrolase | |||
| 17825 | Fis family transcriptional regulator | |||
| 17830 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen913ORF17830P |
| 17835 | DUF2556 domain-containing protein | |||
| 23485 | 363 aa hypothetical protein | |||
| 23490 | RM | StyUK1IV (100% identity) | GATCAG | Sen913ORF23490P |
| 23495 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1655 | MFS transporter | |||
| 1660 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen913ORF1660P |
| 1665 | R | StyUK1IP (99% identity) | CAGAG | Sen913ORF1660P |
| 1670 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23670 | type I restriction-modification system | |||
| 23675 | R | StyUK1MrrP (100% identity) | Sen913MrrP | |
| 23680 | 95 aa hypothetical protein | |||