Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-46 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium OLF-FSR1-STCopenhagen-46 RM systems
Ref: Duceppe,M.-O. et al. unpublished
REBASE ref # 27136
Contig set: 4,849,347 bp
GenBank #: PYUS00000000 (NZ_PYUS00000000)
REBASE acronym: Sen461
Org_num: 31134
All begin C5I04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23625 | endoribonuclease SymE | |||
| 23630 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen461ORF23635P |
| 23635 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen461ORF23635P |
| 23640 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen461ORF23635P |
| 23645 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10450 | RusA family crossover junction | |||
| 10455 | M | M.Sen913ORF10495P (100% identity) | GATC | M.Sen461ORF10455P |
| 10460 | PerC family transcriptional regulator | |||
| 18265 | ribulose-phosphate 3-epimerase | |||
| 18270 | M | M.StyTDamP (100% identity) | GATC | M.Sen461DamP |
| 18275 | cell division protein DamX | |||
| 10195 | drug/metabolite exporter YedA | |||
| 10200 | V | V.StyUK1DcmP (100% identity) | V.Sen461DcmP | |
| 10205 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen461DcmP |
| 10210 | phosphohydrolase | |||
| 17790 | Fis family transcriptional regulator | |||
| 17795 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen461ORF17795P |
| 17800 | DUF2556 domain-containing protein | |||
| 24565 | 62 aa hypothetical protein | |||
| 24570 | M | M.SenBR045ORFCP (100% identity) | M.Sen461ORF24570P | |
| 24575 | 73 aa hypothetical protein | |||
| 23455 | 363 aa hypothetical protein | |||
| 23460 | RM | StyUK1IV (100% identity) | GATCAG | Sen461ORF23460P |
| 23465 | BREX system P-loop protein BrxC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1660 | MFS transporter | |||
| 1665 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen461ORF1665P |
| 1670 | R | StyUK1IP (99% identity) | CAGAG | Sen461ORF1665P |
| 1675 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23640 | type I restriction-modification system | |||
| 23645 | R | StyUK1MrrP (100% identity) | Sen461MrrP | |
| 23650 | 95 aa hypothetical protein | |||