Glaesserella parasuis Nagasaki |
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Putative Glaesserella parasuis Nagasaki RM systems
Ref: Nicholson,T.L. unpublished
REBASE ref # 23169
Complete sequence: 2,348,962 bp
GenBank #: CP018034
REBASE acronym: HpaNN
Org_num: 20939
All begin A2U21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1080 | 71 aa hypothetical protein | |||
| 1085 | R | HpaNagORF1802P (100% identity) | HpaNNORF1115P | |
| 1090 | 0 aa hypothetical protein | |||
| 1095 | 255 aa hypothetical protein | |||
| 1100 | S | S2.HpaNagORF1802P (100% identity) | S1.HpaNNORF1115P | |
| 1105 | S | S.HpaSH03ORF10045P (37% identity) | S2.HpaNNORF1115P | |
| 1110 | anticodon nuclease | |||
| 1115 | M | M.HpaNagORF1802P (100% identity) | M.HpaNNORF1115P | |
| 1120 | 137 aa hypothetical protein | |||
| 4205 | apolipoprotein N-acyltransferase | |||
| 4210 | R | HpaNagORF693P (100% identity) | HpaNNORF4230P | |
| 4215 | anticodon nuclease | |||
| ??? | S | S2.HpaNagORF693P (100% identity) | S1.HpaNNORF4230P | |
| 4225 | S | S1.HpaNagORF693P (100% identity) | S2.HpaNNORF4230P | |
| 4230 | M | M.HpaNagORF693P (100% identity) | M.HpaNNORF4230P | |
| 4235 | RNA polymerase sigma factor RpoE | |||
| 6435 | histidinol-phosphate transaminase | |||
| 6440 | R | HpaNagORF319P (100% identity) | HpaNNORF6450P | |
| ??? | S | S.Gpa912ORF6545P (100% identity) | S.HpaNNORF6450P | |
| 6450 | M | M.Gpa912ORF6545P (100% identity) | M.HpaNNORF6450P | |
| 6455 | phosphoserine transaminase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 850 | cell filamentation protein Fic | |||
| 855 | S | S2.Gpa912ORF880P (100% identity) | S1.HpaNNORF865P | |
| 860 | S | S1.Gpa912ORF880P (100% identity) | S2.HpaNNORF865P | |
| 865 | RM | HpaNagORF1545P (100% identity) | HpaNNORF865P | |
| 870 | 113 aa hypothetical protein | |||
| 3340 | aspartate-semialdehyde dehydrogenase | |||
| 3345 | M | HpaNagORF863P (100% identity) | M.HpaNNORF3345P | |
| 3350 | DDE transposase | |||
| 3845 | peptide chain release factor 1 | |||
| ??? | M | M.HpaSH03ORF2165P (100% identity) | M.HpaNNORF3850P | |
| 3855 | R | HpaNagORF782P (100% identity) | HpaNNORF3850P | |
| 3860 | protein-(glutamine-N5) methyltransferase, | |||
| 6880 | 199 aa hypothetical protein | |||
| 6885 | M | M.HpaNagORF227P (100% identity) | M.HpaNNORF6885P | |
| 6890 | chromosome partitioning protein MukE | |||
| 9035 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |||
| 9040 | M | M.HpaST41ORF8905P (100% identity) | M.HpaNNORF9040P | |
| 9045 | R | HpaST41ORF8905P (100% identity) | HpaNNORF9040P | |
| 9050 | 2-hydroxyacid dehydrogenase | |||
| 9980 | 134 aa hypothetical protein | |||
| 9985 | M | M1.HpaSH03ORF7930P (100% identity) | M1.HpaNNORF9985P | |
| 9990 | M | M2.HpaSH03ORF7930P (100% identity) | M2.HpaNNORF9985P | |
| 9995 | RM | HpaSH03ORF7930P (100% identity) | HpaNNORF9985P | |
| 10000 | VapC toxin family PIN domain ribonuclease | |||
| 10155 | 0 aa hypothetical protein | |||
| 10160 | M | M.HpaNagORF1948P (100% identity) | M.HpaNNORF10160P | |
| 10165 | enoyl-CoA hydratase | |||
| 10515 | 86 aa hypothetical protein | |||
| ??? | M | M.GpaXP11ORF6140P (85% identity) | M.HpaNNORF10520P | |
| 10525 | enoyl-CoA hydratase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1375 | ketol-acid reductoisomerase | |||
| ??? | M | M.HpaNagORF1223P (100% identity) | M.HpaNNORF1380P | |
| 1390 | R | HpaNagORF1223P (100% identity) | HpaNNORF1380P | |
| 1395 | addiction module protein | |||
| 11005 | 62 aa hypothetical protein | |||
| 11010 | M | M.HpaST41ORF1100P (100% identity) | M.HpaNNORF11010P | |
| 11015 | R | HpaST41ORF1100P (100% identity) | HpaNNORF11010P | |
| 11020 | DDE transposase | |||