Clostridioides difficile 020688 |
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Putative Clostridioides difficile 020688 RM systems
Ref: Oliveira,P.H. et al. unpublished
REBASE ref # 27514
Complete sequence: 4,221,948 bp
GenBank #: CP028526
REBASE acronym: Cdi20688
Org_num: 31216
All begin DA426_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3955 | ketose-bisphosphate aldolase | |||
| 3960 | M | M.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | M.Cdi20688ORF3960P |
| 3965 | S | S.Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | S.Cdi20688ORF3960P |
| 3970 | 102 aa hypothetical protein | |||
| 3975 | nucleotidyltransferase domain-containing | |||
| 3980 | 142 aa hypothetical protein | |||
| 3985 | R | Cdo072ORF15725P (100% identity) | CANNNNNNNTAAAG | Cdi20688ORF3960P |
| 3990 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5550 | Rrf2 family transcriptional regulator | |||
| 5555 | M | M.Cdo072ORF14340P (100% identity) | CAAAAA | M.Cdi20688ORF5555P |
| 5560 | patatin-like phospholipase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8935 | cell division protein | |||
| 8940 | R | Cdo072McrBP (100% identity) | Cdi20688McrBP | |
| 8945 | R | Cdo072McrCP (100% identity) | Cdi20688McrCP | |
| 8950 | AAA family ATPase | |||