Salmonella enterica subsp. enterica serovar Dublin USMARC-69838 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Dublin USMARC-69838 RM systems
Ref: Harhay,D.M. et al. unpublished
REBASE ref # 27558
Complete sequence: 4,913,018 bp
GenBank #: CP032449
REBASE acronym: Sen69838
Org_num: 31304
All begin DZA56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21945 | 78 aa hypothetical protein | |||
| 21950 | S | S2.Ssp3CORF11555P (100% identity) | S.Sen69838ORF21955P | |
| 21955 | M | M.Sen69840ORF21505P (100% identity) | M.Sen69838ORF21955P | |
| 21960 | restriction endonuclease | |||
| 21960 | restriction endonuclease | |||
| 21965 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen69838ORF21965P |
| 21970 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen69838ORF21965P |
| 21975 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen69838ORF21965P |
| 21980 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2005 | cell division protein DamX | |||
| 2010 | M | M.StyTDamP (100% identity) | GATC | M.Sen69838DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2510 | DUF2556 domain-containing protein | |||
| 2515 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen69838II |
| 2520 | Fis family transcriptional regulator | |||
| 5900 | TraR/DksA family transcriptional regulator | |||
| 5905 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen69838ORF5905P |
| 5910 | replication endonuclease | |||
| 10110 | 249 aa hypothetical protein | |||
| 10115 | M | M.Ssp3CORF22905P (100% identity) | M.Sen69838ORF10115P | |
| 10120 | ead/Ea22-like family protein | |||
| 10195 | PerC family transcriptional regulator | |||
| 10200 | M | M.Ssp3CORF22825P (100% identity) | M.Sen69838ORF10200P | |
| 10205 | RusA family crossover junction | |||
| 15355 | drug/metabolite exporter YedA | |||
| 15360 | V | V.StyUK1DcmP (100% identity) | V.Sen69838DcmP | |
| 15365 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen69838DcmP |
| 15370 | phosphohydrolase | |||
| 16205 | DUF550 domain-containing protein | |||
| 16210 | M | M.Ssp3CORF17125P (100% identity) | M.Sen69838ORF16210P | |
| 16215 | ead/Ea22-like family protein | |||
| 22115 | 59 aa hypothetical protein | |||
| 22120 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen69838ORF22120P |
| 22125 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19675 | 33 aa hypothetical protein | |||
| 19680 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen69838IP |
| 19685 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen69838I |
| 19690 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21955 | restriction endonuclease subunit M | |||
| 21960 | R | Ssp3CMrrP (100% identity) | Sen69838MrrP | |
| 21965 | DNA methyltransferase | |||