Salmonella enterica subsp. enterica serovar Dublin CVM N45955 |
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Putative Salmonella enterica subsp. enterica serovar Dublin CVM N45955 RM systems
Ref: Zhao,S. unpublished
REBASE ref # 27556
Complete sequence: 4,844,293 bp
GenBank #: CP032387
REBASE acronym: Sen45955
Org_num: 31301
All begin D5F98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14315 | DUF91 domain-containing protein | |||
| 14320 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen45955ORF14330P |
| 14325 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen45955ORF14330P |
| 14330 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen45955ORF14330P |
| 14335 | restriction endonuclease | |||
| 14335 | restriction endonuclease | |||
| 14340 | M | M.Sen69840ORF21505P (100% identity) | M.Sen45955ORF14340P | |
| 14345 | S | S2.Ssp3CORF11555P (100% identity) | S.Sen45955ORF14340P | |
| 14350 | 78 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1280 | RusA family crossover junction | |||
| 1285 | M | M.Ssp3CORF22825P (100% identity) | M.Sen45955ORF1285P | |
| 1290 | PerC family transcriptional regulator | |||
| 1365 | ead/Ea22-like family protein | |||
| 1370 | M | M.Ssp3CORF22905P (100% identity) | M.Sen45955ORF1370P | |
| 1375 | 249 aa hypothetical protein | |||
| 5150 | replication endonuclease | |||
| 5155 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen45955ORF5155P |
| 5160 | TraR/DksA family transcriptional regulator | |||
| 8550 | Fis family transcriptional regulator | |||
| 8555 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen45955ORF8555P |
| 8560 | DUF2556 domain-containing protein | |||
| 9060 | ribulose-phosphate 3-epimerase | |||
| 9065 | M | M.StyTDamP (100% identity) | GATC | M.Sen45955DamP |
| 9070 | cell division protein DamX | |||
| 14165 | IS3 family transposase | |||
| 14170 | R | SspSAL045ORF19515P (100% identity) | GAAC | Sen45955ORF14170P |
| 14175 | 59 aa hypothetical protein | |||
| 20110 | ead/Ea22-like family protein | |||
| 20115 | M | M.Ssp3CORF17125P (100% identity) | M.Sen45955ORF20115P | |
| 20120 | DUF550 domain-containing protein | |||
| 20960 | phosphohydrolase | |||
| 20965 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen45955DcmP |
| 20970 | V | V.StyUK1DcmP (100% identity) | V.Sen45955DcmP | |
| 20975 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16605 | MFS transporter | |||
| 16610 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen45955ORF16610P |
| 16615 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen45955ORF16610P |
| 16620 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14330 | DNA methyltransferase | |||
| 14335 | R | Ssp3CMrrP (100% identity) | Sen45955MrrP | |
| 14340 | restriction endonuclease subunit M | |||