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Putative Yersinia pseudotuberculosis FDAARGOS_342 RM systems
Ref: Duncan,R. et al. unpublished
REBASE ref # 27478
Complete sequence: 4,905,554 bp
GenBank #: CP031780
REBASE acronym: Yps342
Org_num: 31107
All begin CEQ20_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
10760 | XRE family transcriptional regulator | |||
10765 | R | Yps416ORF9320P (100% identity) | Yps342ORF10790P | |
10770 | S | S2.Yps416ORF9320P (100% identity) | S1.Yps342ORF10790P | |
10775 | IS3 family transposase | |||
10780 | S | S1.Yps416ORF9320P (100% identity) | S2.Yps342ORF10790P | |
10785 | anticodon nuclease | |||
10790 | M | M.Yps416ORF9320P (100% identity) | M.Yps342ORF10790P | |
10795 | 491 aa hypothetical protein | |||
13155 | 186 aa hypothetical protein | |||
13160 | S | S.Yps580ORF3300P (100% identity) | S.Yps342ORF13165P | |
13165 | M | M.Yps580ORF3300BP (45% identity) | M.Yps342ORF13165CP | |
13170 | IS3 family transposase | |||
13175 | M | M.Yps580ORF3300BP (54% identity) | M.Yps342ORF13165BP | |
13180 | IS200/IS605 family transposase IS1541B | |||
13185 | M | M.Yps580ORF3300AP (100% identity) | M.Yps342ORF13165AP | |
13190 | R | Yps580ORF3300P (100% identity) | Yps342ORF13165P | |
13195 | XRE family transcriptional regulator | |||
21360 | DUF4102 domain-containing protein | |||
21365 | R | Yps580ORF11425P (100% identity) | GGANNNNNNGTC | Yps342ORF21375P |
21370 | S | S.Yps580ORF11425P (100% identity) | GGANNNNNNGTC | S.Yps342ORF21375P |
21375 | M | M.Yps580ORF11425P (100% identity) | GGANNNNNNGTC | M.Yps342ORF21375P |
21380 | peptidase M48 | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3945 | antitermination protein | |||
3950 | M | M.Yps416ORF2485P (100% identity) | M.Yps342ORF3950P | |
3955 | 229 aa hypothetical protein | |||
19580 | SPOR domain-containing protein | |||
19585 | M | M.Ysi228DamP (100% identity) | GATC | M.Yps342Dam |
19590 | methionine aminopeptidase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
18885 | M48 family peptidase | |||
18890 | R | YpsYpse1MrrP (100% identity) | Yps342MrrP | |
18895 | inovirus Gp2 family protein |