Neisseria gonorrhoeae 980037-18 |
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Putative Neisseria gonorrhoeae 980037-18 RM systems
Ref: Hirk,S. et al. unpublished
REBASE ref # 26993
Contig set: 2,214,439 bp
GenBank #: PTPR00000000 (NZ_PTPR00000000)
REBASE acronym: Ngo3718
Org_num: 30955
All begin C5B25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12285 | 0 aa hypothetical protein | |||
| 12290 | M | M.Ngos1291I (100% identity) | M.Ngo3718ORF12290P | |
| 12295 | ABC transporter | |||
| 7040 | replication-associated recombination protein A | |||
| 7045 | R | NgoWOIP (100% identity) | GAGNNNNNTAC | Ngo3718ORF7045P |
| 7050 | hydroxyacid dehydrogenase | |||
| 7055 | S | S.Ngos1291I (100% identity) | GAGNNNNNTAC | S.Ngo3718ORF7045P |
| 7060 | 186 aa hypothetical protein | |||
| 345 | ATP-dependent Clp protease ATP-binding subunit | |||
| 350 | R | Ngos1291ORF7750P (100% identity) | Ngo3718ORF370P | |
| 355 | sodium:proton exchanger | |||
| 360 | S | S.NgoWNII (100% identity) | S.Ngo3718ORF370P | |
| 365 | DNA damage-inducible protein D | |||
| 370 | M | M.Ngo4718ORF1640P (100% identity) | M.Ngo3718ORF370P | |
| 375 | ADP-L-glycero-D-mannoheptose-6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11170 | transposase | |||
| 11175 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo3718ORF11175P |
| 11180 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo3718ORF11175P |
| 11185 | excinuclease ABC subunit UvrA | |||
| 3235 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo3718ORF3235P |
| 3240 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo3718ORF3235P |
| ??? | H | H.Ngo4718ORF645P (100% identity) | H.Ngo3718ORF3235P | |
| 3250 | uroporphyrinogen decarboxylase | |||
| 6925 | 3-isopropylmalate dehydrogenase | |||
| 6930 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo3718ORF6935P |
| 6935 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo3718ORF6935P |
| 6940 | 3-isopropylmalate dehydratase small subunit | |||
| 9950 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 9955 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo3718ORF9960P |
| 9960 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo3718ORF9960P |
| 9965 | anthranilate synthase component I | |||
| 6065 | GTPase ObgE | |||
| 6070 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo3718ORF6070P |
| 6075 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo3718ORF6070P |
| 6080 | cysteine--tRNA ligase | |||
| 2650 | phenylalanine--tRNA ligase subunit beta | |||
| 2655 | R | NgoWSORF391P (100% identity) | Ngo3718ORF2665P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo3718ORF2665P | |
| 2670 | V | V.NgoWSORF391P (100% identity) | V.Ngo3718ORF2665P | |
| 2675 | phenylalanine--tRNA ligase subunit alpha | |||
| 4925 | RNA-binding transcriptional accessory protein | |||
| 4930 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo3718ORF4930P |
| 4935 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M2.Ngo3718ORF4930P |
| 4940 | R | Ngo4718ORF4860P (100% identity) | GGTGA | Ngo3718ORF4930P |
| 4945 | 93 aa hypothetical protein | |||
| 3275 | 0 aa hypothetical protein | |||
| 3280 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo3718ORF3285P |
| 3285 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo3718ORF3285P |
| 3290 | IS1595 family transposase | |||
| 9140 | 48 aa hypothetical protein | |||
| ??? | M | M.Ngos1291ORF65P (100% identity) | M.Ngo3718ORF9145P | |
| ??? | R | NgoWSORF1801P (100% identity) | Ngo3718ORF9145P | |
| 9160 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo3718ORF9145P | |
| 9165 | 59 aa hypothetical protein | |||
| 7695 | ribosome-recycling factor | |||
| 7700 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.Ngo3718ORF7700P |
| 7705 | R | Ngos1291ORF3515P (100% identity) | GGCC | Ngo3718ORF7700P |
| 7710 | group 2 glycosyl transferase | |||
| 5750 | 0 aa hypothetical protein | |||
| ??? | M | M.NgoCT213ORF40P (100% identity) | M.Ngo3718ORF5755P | |
| 5765 | restriction endonuclease | |||
| ??? | hypothetical protein | |||
| 5765 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo3718ORF5765P |
| 5770 | leucine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | hypothetical protein | M.Ngo3718ORF12925P | |
| ??? | M | M.NgoJH2ORFQP (100% identity) | M.Ngo3718ORF10910P | |
| 10915 | R | Ngos1291ORF8930P (100% identity) | Ngo3718ORF10910P | |
| 10920 | alpha-hydroxy-acid oxidizing protein | |||
| 2150 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 2155 | R | NgoWPIIP (100% identity) | Ngo3718ORF2160P | |
| 2160 | M | type III restriction endonuclease subunit M | M.Ngo3718ORF2160P | |