Clostridioides difficile DSM 28668 |
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Putative Clostridioides difficile DSM 28668 RM systems
Ref: Riedel,T. et al. Int. J. Med. Microbiol. 307 (6), 311-320 (2017)
REBASE ref # 27454
Complete sequence: 4,214,812 bp
GenBank #: CP012309
REBASE acronym: Cdi28668
Org_num: 31020
All begin CDIF28668_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3229 | 687 aa hypothetical protein | |||
| 3230 | R | CdiCd23ORF15855P (99% identity) | Cdi28668ORF3235P | |
| 3231 | 142 aa hypothetical protein | |||
| 3232 | DNA polymerase subunit beta | |||
| 3233 | 102 aa hypothetical protein | |||
| 3234 | S | S.Cdi29637ORF3195P (100% identity) | S.Cdi28668ORF3235P | |
| 3235 | M | M.Cdi29637ORF3195P (100% identity) | M.Cdi28668ORF3235P | |
| 3236 | tagatose-bisphosphate aldolase | |||
| 3348 | 47 aa hypothetical protein | |||
| 3349 | R | CdiS0942ORF16230P (100% identity) | AYGNNNNNNCTG | Cdi28668ORF3354P |
| 3350 | 295 aa hypothetical protein | |||
| 3351 | 97 aa hypothetical protein | |||
| 3352 | 150 aa hypothetical protein | |||
| 3353 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.Cdi28668ORF3354P |
| 3354 | M | M.CdiRSS2ORF3900P (100% identity) | AYGNNNNNNCTG | M.Cdi28668ORF3354P |
| 3355 | 81 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2944 | phospholipase | |||
| 2945 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi28668ORF2945P |
| 2946 | badm/rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2189 | sigma-54-dependent transcriptional regulator | |||
| 2190 | R | Pdi6602McrCP (100% identity) | Cdi28668McrCP | |
| 2191 | R | CdiM161McrBP (100% identity) | Cdi28668McrBP | |
| 2192 | cell division protein FtsZ | |||