Clostridioides difficile DSM 28670 |
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Putative Clostridioides difficile DSM 28670 RM systems
Ref: Riedel,T. et al. Int. J. Med. Microbiol. 307 (6), 311-320 (2017)
REBASE ref # 27454
Complete sequence: 4,191,653 bp
GenBank #: CP012312
REBASE acronym: Cdi28670
Org_num: 31019
All begin CDIF28670_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3334 | 687 aa hypothetical protein | |||
| 3335 | R | CdiNT64ORF17725P (99% identity) | GCAYNNNNNNTTC | Cdi28670ORF3340P |
| 3336 | 142 aa hypothetical protein | |||
| 3337 | DNA polymerase subunit beta | |||
| 3338 | 102 aa hypothetical protein | |||
| 3339 | S | S.PdiZ31ORF1268P (99% identity) | GCAYNNNNNNTTC | S.Cdi28670ORF3340P |
| 3340 | M | M.PdiZ31ORF1268P (99% identity) | GCAYNNNNNNTTC | M.Cdi28670ORF3340P |
| 3341 | tagatose-bisphosphate aldolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3065 | phospholipase | |||
| 3066 | M | M.CdiRSS3ORF14215P (100% identity) | CAAAAA | M.Cdi28670ORF3066P |
| 3067 | badm/rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2289 | sigma-54-dependent transcriptional regulator | |||
| 2290 | R | PdiBJ08McrCP (99% identity) | Cdi28670McrCP | |
| 2291 | R | PdiBJ08McrBP (100% identity) | Cdi28670McrBP | |
| 2292 | cell division protein FtsZ | |||