Clostridioides difficile DSM 102859 |
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Putative Clostridioides difficile DSM 102859 RM systems
Ref: Riedel,T. et al. Int. J. Med. Microbiol. 307 (6), 311-320 (2017)
REBASE ref # 27454
Complete sequence: 4,247,015 bp
GenBank #: CP020378
REBASE acronym: Cdi102859
Org_num: 31002
All begin CDIF102859_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 577 | conjugative transposon protein | |||
| ??? | M | M.Cdi21371ORFBP (100% identity) | M.Cdi102859ORF578P | |
| 579 | S | S.CdiRSS13ORF16830P (100% identity) | S.Cdi102859ORF578P | |
| 580 | nucleotide-binding protein containing | |||
| 581 | R | CdiRSS13ORF16830P (100% identity) | Cdi102859ORF578P | |
| 582 | 78 aa hypothetical protein | |||
| 3450 | 687 aa hypothetical protein | |||
| 3451 | R | CdiRSS13ORF3235P (100% identity) | TAAANNNNGRTG | Cdi102859ORF3456P |
| 3452 | 142 aa hypothetical protein | |||
| 3453 | 126 aa hypothetical protein | |||
| 3454 | 102 aa hypothetical protein | |||
| 3455 | S | S.CdiRSS13ORF3235P (100% identity) | TAAANNNNGRTG | S.Cdi102859ORF3456P |
| 3456 | M | M.CdiRSS13ORF3235P (100% identity) | TAAANNNNGRTG | M.Cdi102859ORF3456P |
| 3457 | tagatose-bisphosphate aldolase | |||
| 3538 | zinc metallopeptidase | |||
| 3539 | R | CdiRSS13ORF2820P (100% identity) | Cdi102859ORF3542P | |
| ??? | S | S.Cdi21371ORFFP (100% identity) | S.Cdi102859ORF3542P | |
| 3541 | DNA-damage-inducible protein D | |||
| 3542 | M | M.CdiRSS13ORF2820P (100% identity) | M.Cdi102859ORF3542P | |
| 3543 | 188 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1193 | 99 aa hypothetical protein | |||
| 1194 | M | M.Cdi102978ORF355P (100% identity) | M.Cdi102859ORF1194P | |
| 1195 | 73 aa hypothetical protein | |||
| 2568 | conjugal transfer protein | |||
| 2569 | M | M.CdiRSS13ORF7540P (100% identity) | M.Cdi102859ORF2569P | |
| 2570 | DNA-repair protein | |||
| 3055 | 73 aa hypothetical protein | |||
| 3056 | M | M.Cdi102978ORF355P (100% identity) | M.Cdi102859ORF3056P | |
| 3057 | 91 aa hypothetical protein | |||
| 3158 | phospholipase | |||
| 3159 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi102859ORF3159P |
| 3160 | badm/rrf2 family transcriptional regulator | |||
| 4080 | 89 aa hypothetical protein | |||
| 4081 | R | CdiRSS13ORF205P (100% identity) | Cdi102859ORF4082P | |
| 4082 | M | M.CdiRSS13ORF205P (100% identity) | M.Cdi102859ORF4082P | |
| 4083 | ATP-dependent endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2350 | sigma-54-dependent transcriptional regulator | |||
| 2351 | R | CdiRSS13McrCP (100% identity) | Cdi102859McrCP | |
| 2352 | R | CdiRSS13McrBP (100% identity) | Cdi102859McrBP | |
| 2353 | cell division protein FtsZ | |||