Xanthomonas oryzae pv. oryzae SK2-3 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas oryzae pv. oryzae SK2-3 RM systems
Ref: Carpenter,S. et al. bioRxivorg, 384289 (2018)
REBASE ref # 27391
Complete sequence: 4,934,446 bp
GenBank #: CP019515
REBASE acronym: XorSK23
Org_num: 30849
All begin BXU03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6390 | plasmid stabilization protein | |||
| 6395 | S | S.XorO221ORF5945P (100% identity) | S.XorSK23ORF6400P | |
| 6400 | M | M.XorYN24ORF1635P (100% identity) | M.XorSK23ORF6400P | |
| 6405 | abortive infection protein | |||
| 6410 | R | XorO221ORF5945P (100% identity) | XorSK23ORF6400P | |
| 6415 | 87 aa hypothetical protein | |||
| 6425 | restriction endonuclease | |||
| 6430 | M | M.XorO221ORF5975P (100% identity) | M.XorSK23ORF6430P | |
| 6435 | 144 aa hypothetical protein | |||
| 6440 | S | S.XorYN24ORF1605P (100% identity) | S.XorSK23ORF6430P | |
| 6445 | 248 aa hypothetical protein | |||
| 6450 | 224 aa hypothetical protein | |||
| 6455 | R | XorO221ORF5975P (100% identity) | XorSK23ORF6430P | |
| 6460 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9935 | 148 aa hypothetical protein | |||
| 9940 | M | M.XorYN24ORF21790P (100% identity) | M.XorSK23ORF9940P | |
| 9945 | 610 aa hypothetical protein | |||
| 9950 | IS30 family transposase | |||
| 9955 | R | XciT21ORF10510P (33% identity) | XorSK23ORF9940P | |
| 9960 | IS5 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22410 | addiction module protein | |||
| 22415 | M | M.XorO221ORF21050P (100% identity) | CCGAGG | M.XorSK23ORF22415P |
| 22420 | R | XorYN24ORF9770P (100% identity) | CCGAGG | XorSK23ORF22415P |
| 22425 | alpha/beta hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6420 | plasmid stabilization protein | |||
| 6425 | R | XorYN24MrrP (100% identity) | XorSK23MrrP | |
| 6430 | N-6 DNA methylase | |||