Anaerolineae bacterium |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Anaerolineae bacterium RM systems
Ref: Ward,L.M. et al. unpublished
REBASE ref # 27177
| Sequence length: | GenBank #: | |
| Chromosome: | (contig set) | QEXW00000000 |
| Chromosome: | (contig set) | QEXX00000000 |
REBASE acronym:
Org_num:
All begin DDG59_, DDG60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15270 | prevent-host-death protein | |||
| 15275 | M | M.CspYORF1958P (68% identity) | M.Aba19ORF15275P | |
| 15280 | cell filamentation protein Fic | |||
| 15285 | 178 aa hypothetical protein | |||
| 15290 | S | S.UbaGMORFIP (58% identity) | S.Aba19ORF15275P | |
| 15295 | 314 aa hypothetical protein | |||
| 15300 | transposase | |||
| 15305 | R | MisDPrORF13090P (60% identity) | Aba19ORF15275P | |
| 15310 | 153 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15125 | TdeIII family type II restriction endonuclease | |||
| 15130 | M | M.Wna131ORF7350P (62% identity) | M.Aba57ORF15130P | |
| 15135 | 272 aa hypothetical protein | |||
| 15125 | R | Cep9333ORF3880P (68% identity) | Aba57ORF15125P | |
| 15130 | DNA methylase | |||
| 10105 | 207 aa hypothetical protein | |||
| 10110 | M | M.Bca13669ORFMP (89% identity) | M.Aba57ORF10110P | |
| 10115 | S | S.Bca13669ORFMP (62% identity) | S.Aba57ORF10110P | |
| 3325 | 219 aa hypothetical protein | |||
| 3330 | M | M.Bca13669ORFCP (79% identity) | M.Aba57ORF3330P | |
| 3335 | 239 aa hypothetical protein | |||
| 8820 | phosphoglycerate kinase | |||
| 8825 | M | M.EsaDix4I (57% identity) | M.Aba57ORF8825P | |
| 8830 | 354 aa hypothetical protein | |||
| 6925 | 308 aa hypothetical protein | |||
| 6930 | M | M.UbaMDORFB2P (15% identity) | M.Aba57ORF6930P | |
| 6935 | NADH-specific enoyl-ACP reductase | |||
| 3825 | 332 aa hypothetical protein | |||
| 3830 | M | M.EsaLHCI (71% identity) | M.Aba57ORF3830P | |
| 3835 | R | Hci629ORFDP (52% identity) | Aba57ORF3830P | |
| 3840 | elongation factor 4 | |||
| 12510 | 25 aa hypothetical protein | |||
| 12515 | M | M.OapP3M1ORF8740P (86% identity) | M.Aba57ORF12515P | |
| 12520 | R | OapP3M1ORF8740P (81% identity) | Aba57ORF12515P | |
| 12525 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | |||
| Chromosome | ||||
| 7045 | RM | CspsBORF14270P (67% identity) | Aba19ORF7045P | |
| 7050 | tRNA (N6-isopentenyl | |||
| 4085 | M | M.TvoIV (48% identity) | M.Aba19ORF4085P | |
| 4090 | R | Tvi861ORF9905P (57% identity) | Aba19ORF4085P | |
| 4095 | 536 aa hypothetical protein | |||
| 4625 | 129 aa hypothetical protein | |||
| 4630 | M | M.TelBORF1640P (90% identity) | M.Aba19ORF4630P | |
| 4635 | 291 aa hypothetical protein | |||
| 12325 | rubrerythrin | |||
| 12330 | M | M.LsaKIBI1ORF13290P (59% identity) | M.Aba19ORF12330P | |
| 12335 | 507 aa hypothetical protein | |||
| 4720 | penicillin acylase family protein | |||
| 4725 | M | M.Bca13669ORFNP (52% identity) | M.Aba19ORF4725P | |
| 4730 | 316 aa hypothetical protein | |||
| 8740 | helicase | |||
| 8745 | RM | TdaGNS1ORF6650P (59% identity) | Aba19ORF8745P | |
| 8500 | ABC transporter substrate-binding protein | |||
| 8505 | M | M.AthUNI1ORF430P (74% identity) | M.Aba19ORF8505P | |
| 8510 | ribosome recycling factor | |||
| 14765 | glycyl-radical enzyme activating protein | |||
| 14770 | R | Mae1910ORF9345P (55% identity) | Aba19ORF14775P | |
| 14775 | M | M.Mae1910ORF9345P (59% identity) | M.Aba19ORF14775P | |
| 14780 | PadR family transcriptional regulator | |||
| 12125 | alanine racemase | |||
| 12130 | M | M.EsaDix5I (65% identity) | M.Aba19ORF12130P | |
| 12135 | ABC transporter ATP-binding protein | |||
| 6275 | fatty acid-binding protein DegV | |||
| 6280 | M | M.GcyVI4D9ORFNP (78% identity) | M.Aba19ORF6280P | |
| 6285 | 126 aa hypothetical protein | |||
| 3340 | HNH endonuclease | |||
| 3345 | M | M.TspHN54ORF875P (84% identity) | M.Aba19ORF3345P | |
| 3350 | protease | |||
| 5495 | type II toxin-antitoxin system mRNA interferase | |||
| 5500 | R | Bca13669ORFAP (71% identity) | Aba19ORF5505P | |
| 5505 | M | M.Bca13669ORFAP (83% identity) | M.Aba19ORF5505P | |
| 13020 | DUF2442 domain-containing protein | |||
| 13025 | M | M.Rca13941ORF407P (84% identity) | M.Aba19ORF13025P | |
| 13030 | R | Cae14535ORF17590P (84% identity) | Aba19ORF13025P | |
| 13035 | restriction endonuclease | |||
| 13030 | restriction endonuclease | |||
| 13035 | R | UbaMSORFW14P (91% identity) | Aba19ORF13040P | |
| 13040 | M | M.CspBV2CORF7665P (87% identity) | M.Aba19ORF13040P | |
| 13045 | transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5175 | adenosine deaminase | |||
| 5180 | M | M.CspMSGORFMP (50% identity) | M.Aba19ORF5180P | |
| 5185 | nucleotidyltransferase | |||
| 5190 | 102 aa hypothetical protein | |||
| 5195 | R | Rca13941ORF397P (77% identity) | Aba19ORF5180P | |
| 5200 | 211 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9105 | YggS family pyridoxal phosphate-dependent | |||
| 9110 | M | M.EsaWC2I (74% identity) | M.Aba57ORF9110P | |
| 9115 | 1158 aa hypothetical protein | |||