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Putative Arthrospira platensis NIES-39 RM systems
Ref: Fujisawa,T. et al. DNA Res. 17 (2), 85-103 (2010)
REBASE ref # 11730
Sequence length: | GenBank #: | |
Chromosome: | 6,788,435 bp | AP011615 |
Chromosome: | 6,818,856 bp | AP026945 |
REBASE acronym: Apl
Org_num: 6010
All begin N39L_, NIES39_A, NIES39_B, NIES39_C, NIES39_E, NIES39_G, NIES39_H, NIES39_J, NIES39_K, NIES39_L, NIES39_M, NIES39_O, NIES39_Q
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6610 | anthranilate phosphoribosyltransferase | |||
6620 | R | Apl39ORF6350P (100% identity) | AplORF6670P | |
6630 | 63 aa hypothetical protein | |||
6640 | 125 aa hypothetical protein | |||
6650 | 438 aa hypothetical protein | |||
6660 | S | S.Apl39ORF6350P (100% identity) | S.AplORF6670P | |
6670 | M | M.SplZORFAP (98% identity) | M.AplORF6670P | |
6680 | serine protease | |||
8960 | 52 aa hypothetical protein | |||
8970 | M | type I restriction enzyme, modification chain | M.AplORF8970P | |
8980 | uncharacterized protein, fragment | |||
320 | 1,4-dihydroxy-2-naphthoate | |||
330 | M | M.Apl39ORF10320P (100% identity) | M.AplORF330P | |
340 | S | S.Apl39ORF10320P (100% identity) | S.AplORF330P | |
350 | methyltransferase | |||
360 | 203 aa hypothetical protein | |||
370 | 190 aa hypothetical protein | |||
380 | R | Apl39ORF10320P (100% identity) | AplORF330P | |
390 | 242 aa hypothetical protein | |||
1200 | 49 aa hypothetical protein | |||
??? | R | Asp9108ORF19130P (100% identity) | AplORF1260P | |
1230 | 99 aa hypothetical protein | |||
1240 | 140 aa hypothetical protein | |||
??? | S | S.Asp9108ORF19130P (100% identity) | S.AplORF1260P | |
1260 | M | M.SplZORFBP (100% identity) | M.AplORF1260P | |
1270 | 109 aa hypothetical protein | |||
1300 | 213 aa hypothetical protein | |||
??? | R | Asp9108ORF19150P (99% identity) | AplORF1310P | |
1360 | 53 aa hypothetical protein | |||
Chromosome | ||||
10310 | 1,4-dihydroxy-2-naphthoate | |||
10320 | M | M.AplORF330P (100% identity) | M.Apl39ORF10320P | |
10330 | S | S.AplORF330P (100% identity) | S.Apl39ORF10320P | |
10340 | methyltransferase | |||
10350 | 38 aa hypothetical protein | |||
10360 | 203 aa hypothetical protein | |||
10370 | 190 aa hypothetical protein | |||
10380 | R | AplORF330P (100% identity) | Apl39ORF10320P | |
10390 | 242 aa hypothetical protein | |||
38230 | 49 aa hypothetical protein | |||
??? | R | Asp9108ORF19130P (100% identity) | Apl39ORF38300P | |
38260 | 99 aa hypothetical protein | |||
38270 | 140 aa hypothetical protein | |||
??? | S | S.AplPORF21900P (100% identity) | S.Apl39ORF38300P | |
38300 | M | M.SplZORFBP (100% identity) | M.Apl39ORF38300P | |
38310 | 109 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3520 | DNA repair protein RecO | |||
3530 | R | Asp9108ORF1515P (100% identity) | GRCGYC | AplORF3540P |
3540 | M | M.SplZORFNP (100% identity) | GRCGYC | M.AplORF3540P |
3550 | photomixotrophic growth related protein PmgA | |||
5810 | 116 aa hypothetical protein | |||
5820 | R | Asp9108ORF2700P (100% identity) | CCGCGG | AplORF5830P |
5830 | M | M.AplYZORF2560P (100% identity) | CCGCGG | M.AplORF5830P |
5840 | 166 aa hypothetical protein | |||
5880 | 153 aa hypothetical protein | |||
??? | RM | Apl39ORF5630P (100% identity) | AplORF5890P | |
5970 | 104 aa hypothetical protein | |||
7160 | helicase | |||
7170 | RM | Apl39ORF6810P (100% identity) | AplORF7170P | |
7180 | 55 aa hypothetical protein | |||
8910 | 56 aa hypothetical protein | |||
8920 | M | M.SplZORFDP (98% identity) | CGTACG | M.AplORF8920P |
8930 | R | SplZORFDP (100% identity) | CGTACG | AplORF8920P |
8940 | 62 aa hypothetical protein | |||
190 | ribosomal RNA small subunit methyltransferase B | |||
200 | M | M.Asp9108ORF4400P (100% identity) | TACGTA | M.AplORF200P |
210 | R | Asp9108ORF4400P (100% identity) | TACGTA | AplORF200P |
220 | C | C.Asp9108ORF4400P (100% identity) | C.AplORF200P | |
230 | polyA polymerase | |||
340 | type I restriction-modification enzyme S | |||
350 | M | M.AplPORF3340P (100% identity) | CCTNAGG | M.AplORF350P |
360 | 203 aa hypothetical protein | |||
990 | 58 aa hypothetical protein | |||
1000 | RM | AplPORF16010P (100% identity) | AplORF1000P | |
1010 | two-component response regulator | |||
1100 | glutathione S-transferase C-terminal domain | |||
??? | M | M.Asp9108ORF14670P (100% identity) | GGTNACC | M.AplORF1110P |
??? | R | Asp9108ORF14670P (100% identity) | GGTNACC | AplORF1110P |
1150 | high light inducible protein | |||
590 | zinc metalloprotease | |||
610 | M | M.Apl39ORF30310P (100% identity) | GCSGC | M.AplORF610P |
620 | 3-oxoacyl-[acyl-carrier-protein] synthase | |||
780 | 54 aa hypothetical protein | |||
790 | M | M.Apl39ORF30460P (100% identity) | M.AplORF790P | |
800 | 142 aa hypothetical protein | |||
470 | hemolysin-like protein | |||
480 | M | M.SplZORFLP (100% identity) | CGATCG | M.AplORF480P |
490 | allophycocyanin beta-18 subunit | |||
2950 | 273 aa hypothetical protein | |||
2960 | M | M.Apl39ORF33810P (100% identity) | GGYRCC | M.AplORF2960P |
2970 | R | Asp9108ORF16900P (100% identity) | GGYRCC | AplORF2960P |
2980 | cobalamin biosynthesis protein CobW | |||
4440 | 485 aa hypothetical protein | |||
4450 | M | M.Asp9108ORF17565P (100% identity) | M.AplORF4450P | |
4460 | 84 aa hypothetical protein | |||
4020 | 704 aa hypothetical protein | |||
4030 | M | M.SplZORFGP (100% identity) | GCTNAGC | M.AplORF4030P |
4040 | R | Asp9108ORF20455P (100% identity) | GCTNAGC | AplORF4030P |
4050 | acriflavin resistance protein family protein | |||
4630 | 265 aa hypothetical protein | |||
4640 | R | Asp9108ORF20760P (100% identity) | CTGCAG | AplI |
4650 | M | M.SplZORFOP (100% identity) | CTGCAG | M.AplI |
4660 | UDP-N-acetylglucosamine-2-epimerase | |||
4910 | S-adenosylmethionine decarboxylase proenzyme | |||
4920 | M | M.Asp9108ORF20865P (100% identity) | GATC | M.AplORF4920P |
4930 | reverse transcriptase homolog | |||
1680 | 130 aa hypothetical protein | |||
1690 | C | C.AplYZORF19815P (100% identity) | C.AplORF1710P | |
1700 | R | Asp9108ORF21810P (100% identity) | RCATGY | AplORF1710P |
1710 | M | M.Asp9108ORF21810P (100% identity) | RCATGY | M.AplORF1710P |
1720 | 49 aa hypothetical protein | |||
6680 | M | M.Apl39ORF47920P (100% identity) | M.AplORF6680P | |
6690 | 63 aa hypothetical protein | |||
570 | 484 aa hypothetical protein | |||
580 | M | M.Asp9108ORF24525P (96% identity) | GACNNNGTC | M.AplORF580P |
590 | R | AplPORF16570P (100% identity) | GACNNNGTC | AplORF580P |
600 | beta-lactamase domain protein | |||
2460 | glutathione-dependent formaldehyde | |||
2470 | M | M.Asp9108ORF25595P (100% identity) | GGWCC | M.AplORF2470P |
2480 | xanthine/uracil/vitamin C permease family | |||
2580 | urease accessory protein D | |||
2590 | R | Asp9108ORF27710P (100% identity) | ACCGGT | AplORF2600P |
2600 | M | M.Asp9108ORF27710P (100% identity) | ACCGGT | M.AplORF2600P |
2610 | 98 aa hypothetical protein | |||
4150 | reverse transcriptase homolog | |||
4160 | M | M.Apl39ORF56040P (100% identity) | M.AplORF4160P | |
4170 | PIN domain protein | |||
5480 | 81 aa hypothetical protein | |||
??? | RM | Asp9108ORF29055P (100% identity) | AplORF5490P | |
5510 | 129 aa hypothetical protein | |||
5740 | 485 aa hypothetical protein | |||
5750 | RM | M.Asp9108ORF29180P (100% identity) | AplORF5750P | |
5760 | 102 aa hypothetical protein | |||
1170 | L-cysteine/cystine lyase | |||
1180 | M | M.Apl39ORF60450P (100% identity) | ATGCAT | M.AplORF1180P |
1190 | R | Apl39ORF60460P (100% identity) | ATGCAT | AplORF1180P |
1200 | phosphoribosyltransferase | |||
1850 | 84 aa hypothetical protein | |||
1860 | M | M.Asp9108ORF31020P (100% identity) | M.AplORF1860P | |
2430 | 175 aa hypothetical protein | |||
2440 | M | M.AplYZORF28525P (100% identity) | TTCGAA | M.AplORF2440P |
2450 | R | AplYZORF28525P (52% identity) | TTCGAA | AplORF2440P |
2460 | 50 aa hypothetical protein | |||
Chromosome | ||||
3300 | DNA repair protein RecO | |||
3310 | R | Asp9108ORF1515P (99% identity) | GRCGYC | Apl39ORF3320P |
3320 | M | M.SplZORFNP (100% identity) | GRCGYC | M.Apl39ORF3320P |
3330 | photomixotrophic growth related protein PmgA | |||
5560 | 116 aa hypothetical protein | |||
5570 | R | Asp9108ORF2700P (100% identity) | CCGCGG | Apl39ORF5580P |
5580 | M | M.Asp9108ORF2700P (100% identity) | M.Apl39ORF5580P | |
5590 | 166 aa hypothetical protein | |||
5620 | 153 aa hypothetical protein | |||
??? | RM | AplORF5890P (100% identity) | Apl39ORF5630P | |
5700 | 143 aa hypothetical protein | |||
6800 | helicase | |||
6810 | RM | AplORF7170P (100% identity) | Apl39ORF6810P | |
6820 | DNA polymerase III beta subunit | |||
8460 | 138 aa hypothetical protein | |||
8470 | M | M.SplZORFDP (100% identity) | CGTACG | M.Apl39ORF8470P |
8480 | R | SplZORFDP (100% identity) | CGTACG | Apl39ORF8470P |
8490 | 75 aa hypothetical protein | |||
9040 | ribosomal RNA small subunit methyltransferase B | |||
9050 | M | M.Asp9108ORF4400P (100% identity) | TACGTA | M.Apl39ORF9050P |
9060 | R | Asp9108ORF4400P (100% identity) | TACGTA | Apl39ORF9050P |
9070 | C | C.Asp9108ORF4400P (100% identity) | C.Apl39ORF9050P | |
9080 | polyA polymerase | |||
10330 | type I restriction-modification enzyme S | |||
10340 | M | M.AplPORF3340P (100% identity) | CCTNAGG | M.Apl39ORF10340P |
10350 | 38 aa hypothetical protein | |||
23630 | 400 aa hypothetical protein | |||
23640 | RM | AplPORF16010P (100% identity) | Apl39ORF23640P | |
23650 | two-component response regulator | |||
29340 | glutathione S-transferase C-terminal domain | |||
??? | M | M.Asp9108ORF14670P (100% identity) | GGTNACC | M.Apl39ORF29350P |
??? | R | Asp9108ORF14670P (100% identity) | GGTNACC | Apl39ORF29350P |
29380 | high light inducible protein | |||
30290 | zinc metalloprotease | |||
30310 | M | M.AplORF610P (100% identity) | GCSGC | M.Apl39ORF30310P |
30320 | 3-oxoacyl-[acyl-carrier-protein] synthase | |||
30450 | 75 aa hypothetical protein | |||
30460 | M | M.AplORF790P (100% identity) | M.Apl39ORF30460P | |
30470 | 142 aa hypothetical protein | |||
31530 | hemolysin-like protein | |||
31540 | M | M.SplZORFLP (100% identity) | CGATCG | M.Apl39ORF31540P |
31550 | allophycocyanin beta-18 subunit | |||
33800 | 273 aa hypothetical protein | |||
33810 | M | M.AplORF2960P (100% identity) | GGYRCC | M.Apl39ORF33810P |
33820 | R | Asp9108ORF16900P (100% identity) | GGYRCC | Apl39ORF33810P |
33830 | cobalamin biosynthesis protein CobW | |||
35100 | 485 aa hypothetical protein | |||
35110 | M | M.Asp9108ORF17565P (100% identity) | M.Apl39ORF35110P | |
35120 | 84 aa hypothetical protein | |||
38350 | 88 aa hypothetical protein | |||
??? | R | Asp9108ORF19150P (100% identity) | CTGGAG | Apl39ORF38360P |
38410 | 34 aa hypothetical protein | |||
40910 | 704 aa hypothetical protein | |||
40920 | M | M.SplZORFGP (100% identity) | GCTNAGC | M.Apl39ORF40920P |
40930 | R | Asp9108ORF20455P (100% identity) | GCTNAGC | Apl39ORF40920P |
40940 | acriflavin resistance protein family protein | |||
41280 | 228 aa hypothetical protein | |||
41290 | RM | Asp9108ORF20650P (100% identity) | Apl39ORF41290P | |
41300 | 80 aa hypothetical protein | |||
41480 | 265 aa hypothetical protein | |||
41490 | R | Asp9108ORF20760P (100% identity) | CTGCAG | Apl39ORF41500P |
41500 | M | M.SplZORFOP (100% identity) | CTGCAG | M.Apl39ORF41500P |
41510 | UDP-N-acetylglucosamine-2-epimerase | |||
41720 | S-adenosylmethionine decarboxylase proenzyme | |||
41730 | M | M.Asp9108ORF20865P (100% identity) | GATC | M.Apl39ORF41730P |
41740 | 46 aa hypothetical protein | |||
43420 | type I restriction-modification system S | |||
43430 | R | Asp9108ORF21810P (100% identity) | RCATGY | Apl39ORF43440P |
43440 | M | M.Asp9108ORF21810P (100% identity) | RCATGY | M.Apl39ORF43440P |
43450 | carbamoyl-phosphate synthase large subunit | |||
47920 | M | M.AplORF6680P (100% identity) | M.Apl39ORF47920P | |
47930 | 348 aa hypothetical protein | |||
48590 | 484 aa hypothetical protein | |||
48600 | M | M.Asp9108ORF24525P (100% identity) | M.Apl39ORF48600P | |
48610 | 73 aa hypothetical protein | |||
50480 | glutathione-dependent formaldehyde | |||
50490 | M | M.Asp9108ORF25595P (100% identity) | GGWCC | M.Apl39ORF50490P |
50500 | xanthine/uracil/vitamin C permease family | |||
54050 | 485 aa hypothetical protein | |||
54060 | M | M.Asp9108ORF27410P (100% identity) | M.Apl39ORF54060P | |
54070 | 84 aa hypothetical protein | |||
54600 | urease accessory protein D | |||
54610 | R | Asp9108ORF27710P (100% identity) | ACCGGT | Apl39ORF54620P |
54620 | M | M.Asp9108ORF27710P (100% identity) | ACCGGT | M.Apl39ORF54620P |
54630 | 98 aa hypothetical protein | |||
56030 | reverse transcriptase homolog | |||
56040 | M | M.AplORF4160P (100% identity) | M.Apl39ORF56040P | |
56050 | PIN domain protein | |||
57290 | 81 aa hypothetical protein | |||
??? | RM | Asp9108ORF29055P (100% identity) | Apl39ORF57300P | |
57320 | 116 aa hypothetical protein | |||
57530 | 485 aa hypothetical protein | |||
57540 | M | M.Asp9108ORF29180P (100% identity) | M.Apl39ORF57540P | |
57550 | 102 aa hypothetical protein | |||
60440 | L-cysteine/cystine lyase | |||
60450 | M | M.AplORF1180P (100% identity) | ATGCAT | M.Apl39ORF60450P |
60460 | 385 aa hypothetical protein | |||
60450 | type II DNA modification methyltransferase | |||
60460 | R | AplORF1180P (100% identity) | ATGCAT | Apl39ORF60460P |
60470 | phosphoribosyltransferase | |||
61110 | 84 aa hypothetical protein | |||
61120 | M | M.Asp9108ORF31020P (100% identity) | M.Apl39ORF61120P | |
61680 | 175 aa hypothetical protein | |||
61690 | M | M.AplYZORF28525P (100% identity) | TTCGAA | M.Apl39ORF61690P |
61700 | 117 aa hypothetical protein | |||
63560 | asparagine synthetase | |||
63570 | M | M.Asp9108DndDP (100% identity) | M.Apl39DndDP | |
63580 | 527 aa hypothetical protein | |||
63570 | 661 aa hypothetical protein | |||
63580 | M | M.Asp9108DndCP (83% identity) | M.Apl39DndCP | |
63590 | 526 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
560 | 2-hydroxy-6-oxohepta-2,4-dienoate | |||
570 | R | Apl39MrrP (100% identity) | AplMrrP | |
580 | DNA methyltransferase | |||
Chromosome | ||||
48580 | 2-hydroxy-6-oxohepta-2,4-dienoate | |||
48590 | R | AplMrrP (100% identity) | Apl39MrrP | |
48600 | DNA methyltransferase |