Xanthomonas oryzae pv. oryzae JL28 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas oryzae pv. oryzae JL28 RM systems
Ref: Zheng,J. et al. unpublished
REBASE ref # 27353
Complete sequence: 4,697,691 bp
GenBank #: CP031458
REBASE acronym: XorJL28
Org_num: 30645
All begin BRM78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6155 | type II toxin-antitoxin system RelE/ParE family | |||
| ??? | S | S1.XorZ173ORF6395P (100% identity) | S.XorJL28ORF6170P | |
| 6170 | M | M.XorZ173ORF6395P (100% identity) | M.XorJL28ORF6170P | |
| 6175 | Abi family protein | |||
| 6180 | R | XorZ173ORF6395P (100% identity) | XorJL28ORF6170P | |
| 6185 | 87 aa hypothetical protein | |||
| 6190 | type II toxin-antitoxin system RelE/ParE family | |||
| ??? | M | M.XorYcbORF17970P (100% identity) | M.XorJL28ORF6200P | |
| 6205 | 144 aa hypothetical protein | |||
| 6210 | S | S1.XorZ173ORF6425P (98% identity) | S1.XorJL28ORF6200P | |
| 6215 | IS5-like element ISXo1 family transposase | |||
| 6220 | S | S2.XorJL33ORF18085P (100% identity) | S2.XorJL28ORF6200P | |
| ??? | S | S1.XorJL33ORF18085P (100% identity) | S3.XorJL28ORF6200P | |
| ??? | S | S.XorMORF3262AP (100% identity) | S4.XorJL28ORF6200P | |
| 6235 | 248 aa hypothetical protein | |||
| 6240 | 224 aa hypothetical protein | |||
| 6245 | IS701 family transposase | |||
| ??? | R | XorK3aORFCP (100% identity) | XorJL28ORF6200P | |
| 6260 | 88 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3575 | lipoyl synthase | |||
| ??? | M | M.XorYC11ORF20530P (100% identity) | CTGCAG | M.XorJL28ORF3580P |
| ??? | R | XorPX061IP (100% identity) | CTGCAG | XorJL28ORF3580P |
| 3590 | PDZ domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2170 | alpha/beta fold hydrolase | |||
| 2175 | R | XorYcbORF21955P (100% identity) | CCGAGG | XorJL28ORF2180P |
| 2180 | M | M.XorZ173ORF2630P (100% identity) | CCGAGG | M.XorJL28ORF2180P |
| 2185 | Fic family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6190 | type II toxin-antitoxin system RelE/ParE family | |||
| ??? | R | XorZ173MrrP (100% identity) | XorJL28MrrP | |
| 6200 | SAM-dependent DNA methyltransferase | |||