Xanthomonas oryzae pv. oryzae JP01 |
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Putative Xanthomonas oryzae pv. oryzae JP01 RM systems
Ref: Zheng,J. et al. unpublished
REBASE ref # 27353
Complete sequence: 4,948,537 bp
GenBank #: CP031460
REBASE acronym: XorJP01
Org_num: 30641
All begin BRM88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18400 | 88 aa hypothetical protein | |||
| 18405 | R | XorZ173ORF6425P (100% identity) | XorJP01ORF18450P | |
| 18410 | 224 aa hypothetical protein | |||
| 18415 | 248 aa hypothetical protein | |||
| ??? | S | S.XorMORF3262AP (100% identity) | S1.XorJP01ORF18450P | |
| ??? | S | S3.XorNE8ORF17680P (100% identity) | S2.XorJP01ORF18450P | |
| 18425 | IS5-like element ISXo1 family transposase | |||
| 18430 | S | S2.XorNE8ORF17680P (56% identity) | S3.XorJP01ORF18450P | |
| 18435 | IS5-like element ISXo1 family transposase | |||
| 18440 | S | S1.XorZ173ORF6425P (98% identity) | S4.XorJP01ORF18450P | |
| 18445 | 144 aa hypothetical protein | |||
| ??? | M | M.XorYcbORF17970P (100% identity) | M.XorJP01ORF18450P | |
| 18460 | type II toxin-antitoxin system RelE/ParE family | |||
| 18465 | 87 aa hypothetical protein | |||
| 18470 | R | XorZ173ORF6395P (100% identity) | XorJP01ORF18480P | |
| 18475 | Abi family protein | |||
| 18480 | M | M.XorZ173ORF6395P (100% identity) | M.XorJP01ORF18480P | |
| ??? | S | S1.XorZ173ORF6395P (100% identity) | S1.XorJP01ORF18480P | |
| 18485 | S | restriction endonuclease subunit S | S2.XorJP01ORF18480P | |
| 18495 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8925 | phage portal protein | |||
| 8935 | M | M.XorZ173ORF15200P (100% identity) | M.XorJP01ORF8935P | |
| 8940 | 248 aa hypothetical protein | |||
| 21065 | PDZ domain-containing protein | |||
| ??? | R | XorPX061IP (100% identity) | CTGCAG | XorJP01ORF21075P |
| ??? | M | M.XorYC11ORF20530P (100% identity) | CTGCAG | M.XorJP01ORF21075P |
| 21080 | lipoyl synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22465 | Fic family protein | |||
| 22470 | M | M.XorZ173ORF2630P (100% identity) | CCGAGG | M.XorJP01ORF22470P |
| 22475 | R | XorYcbORF21955P (100% identity) | CCGAGG | XorJP01ORF22470P |
| 22480 | alpha/beta fold hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18450 | SAM-dependent DNA methyltransferase | |||
| ??? | R | XorZ173MrrP (100% identity) | XorJP01MrrP | |
| 18460 | type II toxin-antitoxin system RelE/ParE family | |||