Megasphaera species AJH120 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Megasphaera species AJH120 RM systems
Ref: Maki,J. and Looft,T. unpublished
REBASE ref # 28230
Complete sequence: 2,652,760 bp
GenBank #: CP029462
REBASE acronym: MspAJH120
Org_num: 30469
All begin DKB62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9200 | MerR family DNA-binding transcriptional | |||
| 9205 | M | M.Pco1220ORF6610P (75% identity) | M.MspAJH120ORF9205P | |
| ??? | S | S.Smo204ORF78P (45% identity) | S1.MspAJH120ORF9205P | |
| 9215 | cytoplasmic protein | |||
| 9220 | integrase | |||
| 9225 | S | S3.PmeBin220ORFAP (30% identity) | S2.MspAJH120ORF9205P | |
| 9230 | S | S1.Ccf10ORF14440P (63% identity) | S3.MspAJH120ORF9205P | |
| 9235 | R | PmeBin387ORFCP (77% identity) | MspAJH120ORF9205P | |
| 9240 | restriction endonuclease | |||
| 11910 | site-specific integrase | |||
| 11915 | S | S1.PmeBin173ORFAP (41% identity) | S1.MspAJH120ORF11925P | |
| 11920 | S | S2.Cfr4P1ORF39550P (17% identity) | S2.MspAJH120ORF11925P | |
| 11925 | M | M.RflFORFXP (64% identity) | M.MspAJH120ORF11925P | |
| 11930 | S | S.LpaCLWORF2P (43% identity) | S3.MspAJH120ORF11925P | |
| 11935 | R | RlaORF744P (45% identity) | MspAJH120ORF11925P | |
| 11940 | 30S ribosomal protein S15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 75 | dCTP deaminase | |||
| 80 | M | M1.PmeBin315ORFAP (60% identity) | M1.MspAJH120ORF80P | |
| 85 | R | PmeBin721ORFAP (79% identity) | MspAJH120ORF80P | |
| 90 | M | M1.PmeBin721ORFAP (86% identity) | M2.MspAJH120ORF80P | |
| 95 | peptidase S58 family protein | |||
| 1055 | transcriptional regulator | |||
| 1060 | M | M.Pte12150ORF618P (52% identity) | M.MspAJH120ORF1060P | |
| 1065 | 192 aa hypothetical protein | |||
| 1175 | 304 aa hypothetical protein | |||
| 1180 | R | PmeBin683ORFAP (73% identity) | MspAJH120ORF1185P | |
| 1185 | M | M.PmeBin480ORFBP (68% identity) | M.MspAJH120ORF1185P | |
| 1190 | XRE family transcriptional regulator | |||
| 7710 | BREX-1 system phosphatase PglZ type A | |||
| 7715 | RM | LbaD12ORFIP (39% identity) | MspAJH120ORF7715P | |
| 7720 | BREX system P-loop protein BrxC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9235 | type I restriction endonuclease subunit R | |||
| 9240 | R | Csp251MrrP (57% identity) | MspAJH120MrrP | |
| 9245 | DNA-3-methyladenine glycosylase I | |||