Dickeya aquatica 174/2 |
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Putative Dickeya aquatica 174/2 RM systems
Ref: Reverchon,S. et al. unpublished
REBASE ref # 27306
Complete sequence: 4,501,560 bp
GenBank #: LT615367
REBASE acronym: Daq1742
Org_num: 30446
All begin DAQ1742_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 500 | Integrase | |||
| 502 | M | M.Dda586ORF397P (96% identity) | M.Daq1742ORF502P | |
| 503 | S | S.Dsp440ORFBP (100% identity) | S.Daq1742ORF502P | |
| 504 | DNA-binding protein in cluster with | |||
| 505 | R | Dsp440ORFBP (99% identity) | Daq1742ORF502P | |
| 506 | predicted metal-dependent hydrolase | |||
| 1212 | serine protease | |||
| 1213 | R | Dsp440ORFEP (100% identity) | Daq1742ORF1216P | |
| 4492 | 282 aa Hypothetical protein | |||
| 1214 | inner membrane protein | |||
| 1215 | S | S.Dsp440ORFEP (100% identity) | S.Daq1742ORF1216P | |
| 1216 | M | M.Dsp440ORFEP (100% identity) | M.Daq1742ORF1216P | |
| 1217 | NgrB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1908 | Phage replication protein | |||
| 1909 | M | M.Ddi6719ORF2935P (52% identity) | M1.Daq1742ORF1909P | |
| 1910 | M | M.Ddi6719ORF2930P (88% identity) | M2.Daq1742ORF1909P | |
| 1911 | Exodeoxyribonuclease VIII | |||
| 2640 | Primosomal protein I | |||
| 2641 | M | M2.Dla30899ORF1260P (88% identity) | M.Daq1742ORF2641P | |
| 2642 | DNA adenine methylase | |||
| 2641 | Modification methylase | |||
| 2642 | M | M1.Dla30899ORF1260P (96% identity) | M.Daq1742ORF2642P | |
| 2643 | Phage-related protein | |||
| 4123 | Ribulose-phosphate 3-epimerase | |||
| 4124 | M | M.Dsp440DamP (100% identity) | M.Daq1742DamP | |
| 4125 | DamX, an inner membrane protein involved in bile | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 657 | FIG00962130: hypothetical protein | |||
| 658 | R | Dsp440ORFDP (100% identity) | Daq1742ORF659P | |
| 659 | M | M.Dsp440ORFDP (100% identity) | M.Daq1742ORF659P | |
| 660 | FIG01152836: hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 506 | predicted metal-dependent hydrolase | |||
| 507 | R | Dsp440MrrP (100% identity) | Daq1742Mrr2P | |
| 508 | FIG00638808: hypothetical protein | |||