Mycoplasma bovis NADC56 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mycoplasma bovis NADC56 RM systems
Ref: Register,K. and Bayles,D. unpublished
REBASE ref # 27324
Complete sequence: 1,085,052 bp
GenBank #: CP022592
REBASE acronym: Mbo56
Org_num: 30480
All begin CH336_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1205 | integrase | |||
| 1210 | S | S3.MboJ81ORF1210P (100% identity) | S1.Mbo56ORF1230P | |
| 1215 | transposase | |||
| 1220 | S | S3.MboVK22ORF4740P (100% identity) | S2.Mbo56ORF1230P | |
| 1225 | S | S1.MboXBY01ORFLP (100% identity) | S3.Mbo56ORF1230P | |
| 1230 | M | M.MboC70ORF1300P (100% identity) | M.Mbo56ORF1230P | |
| 1235 | IS4 family transposase | |||
| 1240 | SAM-dependent methyltransferase | |||
| 1245 | IS3 family transposase | |||
| 1250 | R | MboNADC59ORF1335P (100% identity) | Mbo56ORF1230P | |
| 1255 | 756 aa hypothetical protein | |||
| 3410 | IS3 family transposase | |||
| 3415 | S | S1.MboC70ORF3525P (100% identity) | S1.Mbo56ORF3445P | |
| 3420 | ATPase | |||
| ??? | S | S2.Mbo62ORF3745P (100% identity) | S2.Mbo56ORF3445P | |
| 3430 | site-specific integrase | |||
| 3435 | R | MbosMb1ORF1005P (100% identity) | Mbo56ORF3445P | |
| 3440 | S | S1.MboNADC59ORF3965P (100% identity) | S3.Mbo56ORF3445P | |
| 3445 | M | M.MbosMb1ORF1005P (100% identity) | M.Mbo56ORF3445P | |
| 3450 | IS4 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1425 | 109 aa hypothetical protein | |||
| 1435 | R | MboXBY01ORFAP (100% identity) | Mbo56ORF1440P | |
| 1440 | M | M.Mbos184ORF3155P (100% identity) | M.Mbo56ORF1440P | |
| 1445 | ribonuclease HIII | |||
| 1595 | 453 aa hypothetical protein | |||
| 1600 | M | M.MboXBY01ORFBP (100% identity) | M.Mbo56ORF1600P | |
| 1605 | 30S ribosomal protein S2 | |||
| 2095 | excinuclease ABC subunit B | |||
| 2100 | M | M.MbosMb1ORF2105P (100% identity) | M.Mbo56ORF2100P | |
| 2105 | 150 aa hypothetical protein | |||
| 2725 | BspA family leucine-rich repeat surface protein | |||
| 2730 | R | MbosMb1ORF1625P (100% identity) | CTAG | Mbo56ORF2735P |
| 2735 | M | M.MbosMb1ORF1625P (100% identity) | CTAG | M.Mbo56ORF2735P |
| 2740 | DNA polymerase III subunit delta | |||
| 3875 | 378 aa hypothetical protein | |||
| 3880 | M | M1.MbosMb1ORF3285P (100% identity) | GCATC | M1.Mbo56ORF3880P |
| 3885 | M | M2.MbosMb1ORF3285P (100% identity) | GCATC | M2.Mbo56ORF3880P |
| 3890 | 30S ribosomal protein S16 | |||
| 3970 | 78 aa hypothetical protein | |||
| 3975 | M | M.MboKRB1ORF3645P (100% identity) | M.Mbo56ORF3975P | |
| 3980 | 98 aa hypothetical protein | |||
| 4120 | IS3 family transposase | |||
| 4130 | R | MbosMb1ORF3525P (100% identity) | GANTC | Mbo56ORF4135P |
| 4135 | M | M.MbosMb1ORF3525P (100% identity) | GANTC | M.Mbo56ORF4135P |
| 4140 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 865 | 150 aa hypothetical protein | |||
| 870 | R | MboNADC59ORF875P (100% identity) | Mbo56ORF875P | |
| 875 | M | M1.Mbo68ORF885P (99% identity) | M1.Mbo56ORF875P | |
| 880 | M | M2.MboN1ORF850P (100% identity) | M2.Mbo56ORF875P | |
| 885 | M | M3.Mbo108ORF795P (100% identity) | M3.Mbo56ORF875P | |
| 890 | trigger factor | |||
| 4010 | Fic family protein | |||
| ??? | M | M.MboXBY01ORFHP (100% identity) | M.Mbo56ORF4015P | |
| 4025 | IS3 family transposase | |||
| 4010 | Fic family protein | |||
| ??? | M | M.MboXBY01ORFHP (100% identity) | M.Mbo56ORFAP | |
| 4025 | IS3 family transposase | |||