Neisseria bergeri C2008000328 |
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Putative Neisseria bergeri C2008000328 RM systems
Ref: Nichols,M. et al. unpublished
REBASE ref # 27132
Contig set: 2,255,536 bp
GenBank #: POWY00000000 (NZ_POWY00000000)
REBASE acronym: Nbe328
Org_num: 30369
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 61 | 97 aa hypothetical protein | |||
| 64 | RM | Nbe329ORFNP (100% identity) | Nbe328ORFOP | |
| 72 | 62 aa hypothetical protein | |||
| 79 | carbamoyl-phosphate synthase large subunit | |||
| 86 | M | M.Nsu2238ORFAP (100% identity) | M.Nbe328ORFFP | |
| 87 | R | Nsu2238ORFAP (100% identity) | Nbe328ORFFP | |
| 88 | membrane protein | |||
| 142 | 100 aa hypothetical protein | |||
| 143 | R | Nbe329ORFLP (100% identity) | Nbe328ORFMP | |
| 144 | M | M.Nbe329ORFLP (100% identity) | M.Nbe328ORFMP | |
| 145 | NADH:ubiquinone oxidoreductase subunit 5 /Multisubunit Na+/H+ antiporter, MnhA subunit, partial | |||
| 144 | 100 aa hypothetical protein | |||
| 145 | M | M.Ngo14ORF82P (100% identity) | RGCGCY | M.Nbe328ORFCP |
| 146 | R | Nbe329ORFAP (100% identity) | RGCGCY | Nbe328ORFCP |
| 147 | Uncharacterised protein | |||
| 211 | Uncharacterised protein | |||
| 213 | C | C.Npo18661ORFJP (100% identity) | C.Nbe328ORFNP | |
| 214 | R | Nbe329ORFMP (100% identity) | Nbe328ORFNP | |
| 215 | M | M.Nbe329ORFMP (100% identity) | M.Nbe328ORFNP | |
| 217 | outer membrane protein P1 | |||
| 208 | 60 aa hypothetical protein HMPREF0602_1556 | |||
| 211 | RM | Nbe329ORFEP (100% identity) | GCGGAG | Nbe328ORFAP |
| 221 | 117 aa hypothetical protein NMY233_1482 | |||
| 287 | 81 aa hypothetical protein | |||
| 289 | M | M.Nbe329DndCP (100% identity) | M.Nbe328DndCP | |
| 292 | 86 aa hypothetical protein | |||
| 271 | 203 aa hypothetical protein | |||
| 272 | M | M.Nbe329ORFGP (100% identity) | M.Nbe328ORFGP | |
| 278 | V | V.Nbe329ORFGP (100% identity) | V.Nbe328ORFGP | |
| 281 | phenylalanyl-tRNA synthetase subunit alpha | |||
| 328 | 70 aa hypothetical protein | |||
| 329 | R | Nbe329ORFBP (100% identity) | Nbe328ORFDP | |
| 331 | 61 aa hypothetical protein | |||
| 473 | 71 aa hypothetical protein | |||
| 474 | M | M.Nbe329ORFDP (100% identity) | M.Nbe328ORFBP | |
| 477 | 103 aa hypothetical protein | |||
| 837 | ATP-dependent RNA helicase HrpA | |||
| 841 | R | Nbe329ORFFP (100% identity) | Nbe328ORFEP | |
| 842 | M | M.Nbe329ORFFP (100% identity) | M.Nbe328ORFEP | |
| 843 | sulfatase family protein | |||
| 825 | CopG family transcriptional regulator | |||
| 826 | M | M.Nbe329ORFJP (100% identity) | M.Nbe328ORFKP | |
| 827 | 329 aa hypothetical protein | |||
| 1123 | 79 aa hypothetical protein | |||
| 1124 | R | Nsu1510ORFAP (58% identity) | Nbe328ORFJP | |
| 1125 | 71 aa hypothetical protein | |||
| 1901 | 173 aa hypothetical protein | |||
| 1903 | M | M.Nbe329ORFHP (100% identity) | M.Nbe328ORFIP | |
| 1906 | DUF541 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 291 | tRNA 2-thiocytidine synthetase TtcA | |||
| 293 | R | Nbe329ORFIP (100% identity) | Nbe328ORFHP | |
| 298 | M | M.Nbe329ORFIP (95% identity) | M.Nbe328ORFHP | |
| 301 | 158 aa hypothetical protein | |||
| 816 | tRNA pseudouridine synthase B | |||
| ??? | M | M.Nbe329ORFKP (100% identity) | M.Nbe328ORFLP | |
| 824 | R | Nbe329ORFKP (100% identity) | Nbe328ORFLP | |
| 828 | alpha-hydroxy-acid oxidizing protein | |||