Yersinia pseudotuberculosis M89 |
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Putative Yersinia pseudotuberculosis M89 RM systems
Ref: Hammerl,J.A. unpublished
REBASE ref # 27118
Contig set: 4,665,837 bp
GenBank #: NCLA00000000 (NZ_NCLA00000000)
REBASE acronym: YpsM89
Org_num: 30325
All begin B7R75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3445 | integrase | |||
| 3450 | R | YpsI8ORF14545P (100% identity) | YpsM89ORF3460P | |
| 3455 | S | S.YpsI8ORF14545P (100% identity) | S.YpsM89ORF3460P | |
| 3460 | M | M.YpsI8ORF14545P (100% identity) | M.YpsM89ORF3460P | |
| 3465 | peptidase M48 | |||
| 11950 | metal-dependent hydrolase | |||
| 11955 | R | YpsST42ORFAP (100% identity) | TGACNNNNNCTC | YpsM89ORF11970P |
| 11960 | hydroxyacid dehydrogenase | |||
| 11965 | S | S1.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | S.YpsM89ORF11970P |
| 11970 | M | M.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | M.YpsM89ORF11970P |
| 11975 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15215 | DNA polymerase III subunit epsilon | |||
| ??? | M | M.Yps1ORF1410P (100% identity) | M.YpsM89ORF15220P | |
| 15225 | replication protein | |||
| 11340 | 801 aa hypothetical protein | |||
| ??? | M | M.YpsMD67ORF59P (100% identity) | M.YpsM89ORF11345P | |
| 11350 | DNA polymerase III subunit epsilon | |||
| 4985 | ribulose-phosphate 3-epimerase | |||
| 4990 | M | M.Ysi228DamP (100% identity) | GATC | M.YpsM89DamP |
| 4995 | SPOR domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11940 | 206 aa hypothetical protein | |||
| 11945 | R | YpsYpse1MrrP (100% identity) | YpsM89MrrP | |
| 11950 | metal-dependent hydrolase | |||