Escherichia coli 2012C-4196 |
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Putative Escherichia coli 2012C-4196 RM systems
Ref: Patel,P.N. et al. unpublished
REBASE ref # 27349
Contig set: 5,425,894 bp
GenBank #: PVZZ00000000 (NZ_PVZZ00000000)
REBASE acronym: Eco4196
Org_num: 30561
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 155 | Uncharacterised protein | |||
| 157 | M | M.Eco4177ORF27355P (100% identity) | M.Eco4196ORFMP | |
| 162 | Uncharacterised protein | |||
| 263 | 123 aa hypothetical protein J46_0121 | |||
| 264 | M | M.EcoMBT5ORF29545P (58% identity) | M.Eco4196ORFGP | |
| 271 | DNA methyltransferase | |||
| 1743 | prophage protein ninB | |||
| 1746 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco4196ORFFP |
| 1750 | 575 aa hypothetical protein ECEPECA14_1565 | |||
| 1838 | ribosome inactivating protein | |||
| 1839 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco4196ORFHP | |
| 1842 | 104 aa hypothetical protein | |||
| 1882 | flagella biosynthesis regulator Flk | |||
| 1883 | M | M.Sen7113ORF20540P (100% identity) | M.Eco4196ORFEP | |
| 1884 | 63 aa hypothetical protein AD31_3131 | |||
| 2242 | transmembrane subunit | |||
| ??? | V | V.SflFF64DcmP (100% identity) | V.Eco4196DcmP | |
| 2247 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco4196DcmP |
| 2249 | HD domain protein | |||
| 3626 | 114 aa hypothetical protein | |||
| 3627 | M | M.Sbo812ORFAP (100% identity) | M.Eco4196ORFAP | |
| 3630 | TraR/DksA family transcriptional regulator | |||
| 5880 | 81 aa hypothetical protein | |||
| 5883 | M | M.Eco4177ORF15675P (100% identity) | GATC | M.Eco4196ORFNP |
| 5887 | unnamed protein product | |||
| 6964 | 116 aa hypothetical protein | |||
| 6968 | M | M.Eco3375ORFEP (100% identity) | M.Eco4196ORFBP | |
| 6970 | DUF551 domain-containing protein | |||
| 8884 | cell division protein DamX | |||
| 8887 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4196DamP |
| 8889 | Tryptophan--tRNA ligase | |||
| 9170 | 59 aa hypothetical protein SFxv_3614 | |||
| 9171 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco4196ORFCP |
| 9173 | tRNA-dihydrouridine synthase B | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6182 | peptidase S8 | |||
| ??? | M | M.Eco4176ORF11520AP (99% identity) | M.Eco4196ORFJAP | |
| 6189 | IS600 ORF1 | |||
| 6190 | transposase | |||
| 6191 | IS3 family transposase | |||
| 6192 | M | M.Eco4177ORF15035BP (100% identity) | M.Eco4196ORFJBP | |
| ??? | R | Kpn0718ORF815P (91% identity) | Eco4196ORFJP | |
| 6196 | 179 aa hypothetical protein G785_04624 | |||
| 8107 | 627 aa hypothetical protein AXW12_14375 | |||
| 8108 | M | M.Eco3375I (100% identity) | GTCTC | M.Eco4196I |
| 8110 | R | Ecow264ORF380P (100% identity) | GTCTC | Eco4196IP |
| 8111 | 102 aa hypothetical protein | |||