Ref: Lucas,S. et al. unpublished

REBASE ref # 14280

Sequence length:GenBank #:
Chromosome: 2,046,464 bp CP002281 (NC_014632)
plasmid pILYOP01: 961,624 bp CP002282 (NC_014633)
plasmid pILYOP02: 124,226 bp CP002283 (NC_014634)

REBASE acronym: Ipo

Org_num: 6387

 

All begin Ilyop_, Ilyop_R

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
905 329 aa hypothetical protein
??? R AspGa3ORF21740P (58% identity) IpoORF908P
907 S S.MaeS298ORF1560P (37% identity) S.IpoORF908P
908 M type I restriction-modification system methyltransferase subunit M.IpoORF908P
909 229 aa hypothetical protein
 
1052 296 aa conserved hypothetical protein
1053 R CesCF002ORF8225P (73% identity) IpoORF1055P
1054 S S.CtuTJORFBP (44% identity) S.IpoORF1055P
1055 M M.Alu226ORF14115P (47% identity) M.IpoORF1055P
1056 201 aa hypothetical protein
 
1662 83 aa hypothetical protein
1663 R AbuCR60ORFBP (43% identity) IpoORF1663P
32 choline/carnitine/betaine transporter
 
plasmid pILYOP02
 
2856 diguanylate cyclase
2857 R Pat19335IP (73% identity) IpoORF2860P
2858 90 aa hypothetical protein
2859 117 aa hypothetical protein
2860 M M.Pat19335I (83% identity) M.IpoORF2860P
2861 S S.MspMB1ORF471P (42% identity) S.IpoORF2860P
2862 pseudogene
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
867 integral membrane protein MviN
868 RM M.Fne51357ORF1454P (38% identity) IpoORF868P
869 93 aa hypothetical protein
 
1047 340 aa hypothetical protein
1048 M M.Bsp54424ORF3300P (40% identity) M.IpoORF1048P
1049 53 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
plasmid pILYOP01
 
2072 339 aa conserved hypothetical protein
2073 R Kki66ORF1900P (33% identity) IpoORF2074P
2074 M M.FpsVQ50ORF10650P (27% identity) M.IpoORF2074P
2075 phage repressor
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