Escherichia coli WH333 |
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Putative Escherichia coli WH333 RM systems
Ref: Xu,A. et al. unpublished
REBASE ref # 27038
Contig set: 4,901,216 bp
GenBank #: PSNS00000000 (NZ_PSNS00000000)
REBASE acronym: EcoWH333
Org_num: 30186
All begin C4M75_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24755 | 101 aa hypothetical protein | |||
| 24760 | M | M.SflN92ORF24820P (100% identity) | M.EcoWH333ORF24760P | |
| 24765 | 73 aa hypothetical protein | |||
| 21495 | DUF2556 domain-containing protein | |||
| 21500 | M | M.EcosalpORF2760P (100% identity) | ATGCAT | M.EcoWH333ORF21500P |
| 21505 | Fis family transcriptional regulator | |||
| 24340 | PerC family transcriptional regulator | |||
| 24345 | M | M.EcosalpORF23215P (100% identity) | GATC | M.EcoWH333ORF24345P |
| 24350 | LexA family transcriptional regulator | |||
| 16690 | cell division protein DamX | |||
| 16695 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoWH333DamP |
| 16700 | ribulose-phosphate 3-epimerase | |||
| 4400 | replication endonuclease | |||
| 4405 | M | M.EcoSEC30ORF14280P (100% identity) | M.EcoWH333ORF4405P | |
| 4410 | AAA family ATPase | |||
| 1705 | HNH endonuclease | |||
| 1710 | M | M.MmoL241ORF1975P (100% identity) | M.EcoWH333ORF1710P | |
| 1715 | 618 aa hypothetical protein | |||
| 5850 | EamA family transporter | |||
| 5855 | V | V.SflC32DcmP (74% identity) | V.EcoWH333DcmP | |
| 5860 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoWH333DcmP |
| 5865 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17930 | DNA invertase | |||
| ??? | R | SflLIN6GmrSDP (37% identity) | EcoWH333GmrDP | |
| 17940 | 0 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12815 | NinE family protein | |||
| 12820 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoWH333ORF12820P |
| 12825 | recombination protein NinB | |||