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Putative Dickeya dianthicola DE440 RM systems
Ref: Cai,W. et al. unpublished
REBASE ref # 27005
Contig set: 4,867,525 bp
GenBank #: PJJB00000000 (NZ_PJJB00000000)
REBASE acronym: Ddi440
Org_num: 30160
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
9 | M48 family peptidase | |||
12 | R | DdiME23ORF921P (100% identity) | Ddi440ORFDP | |
16 | DUF4433 domain-containing protein | |||
17 | 113 aa hypothetical protein | |||
18 | DUF4433 domain-containing protein | |||
19 | 82 aa hypothetical protein | |||
20 | DUF4433 domain-containing protein | |||
21 | 69 aa hypothetical protein | |||
22 | S | S.DdiME23ORF921P (100% identity) | S.Ddi440ORFDP | |
24 | M | M.DdiPA24ORF4615P (100% identity) | M.Ddi440ORFDP | |
28 | Uncharacterised protein | |||
862 | 99 aa hypothetical protein | |||
863 | R | DdiPA24ORF3290P (100% identity) | Ddi440ORFHP | |
867 | M | M.DdiPA24ORF3290P (100% identity) | M.Ddi440ORFHP | |
871 | S | S1.DdiPA24ORF3290P (100% identity) | S.Ddi440ORFHP | |
874 | type I restriction-modification system, subunit S | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3 | 60 aa hypothetical protein | |||
4 | M | M.DdiPA24ORF7340P (100% identity) | M.Ddi440ORFEP | |
5 | 857 aa hypothetical protein, partial | |||
106 | DNA-invertase | |||
109 | M | M.DdiPA24ORF15945P (100% identity) | M.Ddi440ORFCP | |
110 | R | DdiME30ORF15960P (100% identity) | Ddi440ORFCP | |
111 | 132 aa hypothetical protein DDI_2943 | |||
187 | 89 aa hypothetical protein | |||
188 | R | DdiPA24ORF7785P (100% identity) | Ddi440ORFAP | |
189 | M | M.DdiPA24ORF7785P (100% identity) | M.Ddi440ORFAP | |
190 | 66 aa hypothetical protein | |||
188 | SPOR domain-containing protein | |||
191 | M | M.Dsp2401ORFJP (100% identity) | GATC | M.Ddi440ORFBP |
193 | 97 aa hypothetical protein | |||
289 | 67 aa hypothetical protein | |||
293 | M | M.DdiPA24ORF16205P (100% identity) | M.Ddi440ORFGP | |
297 | 222 aa hypothetical protein | |||
416 | 68 aa hypothetical protein | |||
417 | M | M.DdiPA24ORF3960P (100% identity) | M.Ddi440ORFIP | |
419 | R | DdiPA24ORF3960P (100% identity) | Ddi440ORFIP | |
421 | 133 aa hypothetical protein | |||
427 | DNA cytosine methyltransferase | |||
430 | M | M.DdiPA24ORF3940P (100% identity) | M.Ddi440ORFKP | |
434 | 76 aa hypothetical protein | |||
594 | Transporter, LysE family | |||
596 | V | V.DdiPA24ORF2190P (100% identity) | V.Ddi440ORFFP | |
597 | M | M.DdiME30ORF2190P (100% identity) | M.Ddi440ORFFP | |
598 | R | DdiPA24ORF2190P (100% identity) | Ddi440ORFFP | |
599 | 159 aa hypothetical protein |