Photorhabdus laumondii subsp. laumondii TT01 |
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Putative Photorhabdus laumondii subsp. laumondii TT01 RM systems
Ref: Zamora-Lagos,M.-A. et al. unpublished
REBASE ref # 27248
Complete sequence: 5,687,677 bp
GenBank #: CP024901
REBASE acronym: PlaTT01
Org_num: 30083
All begin PluTT01m_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22065 | integrase | |||
| 22070 | M | M.PluTII (100% identity) | GGANNNNNNRTGA | M.PlaTT01ORF22070P |
| ??? | S | S.PluTII (100% identity) | GGANNNNNNRTGA | S.PlaTT01ORF22070P |
| 22080 | anticodon nuclease | |||
| 22085 | R | PluTIIP (100% identity) | GGANNNNNNRTGA | PlaTT01ORF22070P |
| 22090 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 440 | ribulose-phosphate 3-epimerase | |||
| 445 | M | M.PluTDamP (100% identity) | M.PlaTT01DamP | |
| 450 | SPOR domain-containing protein | |||
| 1195 | 115 aa hypothetical protein | |||
| 1200 | RM | PluTORF233P (100% identity) | PlaTT01ORF1200P | |
| 1205 | ISL3 family transposase | |||
| 1725 | type VI secretion system protein TssA | |||
| 1730 | M | M.PluTIV (100% identity) | CCWGG | M.PlaTT01ORF1730P |
| 1735 | V | V.PluTIVP (100% identity) | V.PlaTT01ORF1730P | |
| ??? | R | PluTIVP (100% identity) | CCWGG | PlaTT01ORF1730P |
| 1745 | 116 aa hypothetical protein | |||
| 3050 | ATP-dependent endonuclease | |||
| 3055 | R | PluTI (100% identity) | GGCGCC | PlaTT01ORF3060P |
| 3060 | M | M.PluTI (100% identity) | GGCGCC | M.PlaTT01ORF3060P |
| 3065 | IS982 family transposase | |||
| 9940 | 94 aa hypothetical protein | |||
| 9945 | R | PluTIIIP (100% identity) | AGGCCT | PlaTT01ORF9950P |
| 9950 | M | M.PluTIII (100% identity) | AGGCCT | M.PlaTT01ORF9950P |
| 9955 | flagellar type III secretion system protein | |||
| 13895 | abortive infection family protein | |||
| 13900 | R | PluTVP (100% identity) | PlaTT01ORF13905P | |
| 13905 | M | M.PluTV (100% identity) | M.PlaTT01ORF13905P | |
| 13910 | 104 aa hypothetical protein | |||
| 15110 | 84 aa hypothetical protein | |||
| ??? | M | M.PluTORF2942P (100% identity) | M.PlaTT01ORF15115P | |
| 15120 | 79 aa hypothetical protein | |||
| 17565 | 133 aa hypothetical protein | |||
| 17570 | M | M.Plu2NORF17030P (98% identity) | M.PlaTT01ORF17570P | |
| 17575 | XRE family transcriptional regulator | |||
| 17740 | 116 aa hypothetical protein | |||
| 17745 | M | M.PluTORF3449P (100% identity) | M.PlaTT01ORF17745P | |
| 17750 | 145 aa hypothetical protein | |||
| 17805 | DNA-binding protein | |||
| 17810 | M | DNA modification methylase | M.PlaTT01ORF17810P | |
| 17815 | 66 aa hypothetical protein | |||