Escherichia coli 700416 |
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Putative Escherichia coli 700416 RM systems
Ref: Xu,A. et al. Genome Announc 6 (11), e00134-18 (2018)
REBASE ref # 26937
Contig set: 5,117,103 bp
GenBank #: POSX00000000 (NZ_POSX00000000)
REBASE acronym: Eco700416
Org_num: 29990
All begin C1T14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19050 | endoribonuclease SymE | |||
| 19055 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco700416ORF19060P |
| 19060 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco700416ORF19060P |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | Eco700416ORF19060P |
| 19070 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24200 | 81 aa hypothetical protein | |||
| 24205 | M | M.EcosS3ORF15775P (100% identity) | M.Eco700416ORF24205P | |
| 24210 | ATP-binding protein | |||
| 18180 | DUF2556 domain-containing protein | |||
| 18185 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.Eco700416ORF18185P |
| 18190 | Fis family transcriptional regulator | |||
| 11400 | drug/metabolite exporter YedA | |||
| 11405 | V | V.EcoYP3DcmP (100% identity) | V.Eco700416DcmP | |
| 11410 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco700416DcmP |
| 11415 | phosphohydrolase | |||
| 10850 | cell division protein DamX | |||
| 10855 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco700416DamP |
| 10860 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19040 | R | SenHNK130McrCP (100% identity) | Eco700416McrCP | |
| 19045 | R | SenHNK130McrBP (100% identity) | Eco700416McrBP | |
| 19050 | endoribonuclease SymE | |||
| ??? | type I restriction-modification system endonuclease | |||
| 19070 | R | SenHNK130MrrP (100% identity) | Eco700416MrrP | |
| 19075 | GTPase | |||