Vibrio diazotrophicus 65.10M |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio diazotrophicus 65.10M RM systems
Ref: Castillo,D. et al. unpublished
REBASE ref # 26928
Contig set: 4,824,448 bp
GenBank #: POSM00000000 (NZ_POSM00000000)
REBASE acronym: Vdi6510M
Org_num: 29979
All begin C1O25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20070 | ribosome biogenesis GTPase YlqF | |||
| 20075 | R | Pac5ORFAP (77% identity) | Vdi6510MORF20080P | |
| 20080 | M | M.VspVPAP30ORF14500P (90% identity) | M.Vdi6510MORF20080P | |
| 20085 | S | S.Mfu18476ORFEP (52% identity) | S.Vdi6510MORF20080P | |
| ??? | ATP-binding protein | |||
| 14120 | 0 aa hypothetical protein | |||
| 14125 | S | S.Vph10884I (98% identity) | S.Vdi6510MORF14130P | |
| 14130 | M | M.Vph10884I (96% identity) | M.Vdi6510MORF14130P | |
| 14135 | ATP-binding protein | |||
| 14140 | R | PbaCE70ORF21830P (98% identity) | Vdi6510MORF14130P | |
| 14145 | ATP-binding protein | |||
| 9190 | 507 aa hypothetical protein | |||
| 9195 | R | Vvu117IIIP (98% identity) | Vdi6510MORF9205P | |
| 9200 | S | S.EcoB9S24ORF3190P (72% identity) | S.Vdi6510MORF9205P | |
| 9205 | M | M2.Vpa19139ORFAP (96% identity) | M2.Vdi6510MORF9205P | |
| 9210 | M | M1.Vvu117III (97% identity) | M1.Vdi6510MORF9205P | |
| 9215 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16090 | DNA biosynthesis protein | |||
| 16095 | M | M.VflPMORF6465P (90% identity) | M.Vdi6510MORF16095P | |
| 16100 | 193 aa hypothetical protein | |||
| 18650 | 181 aa hypothetical protein | |||
| 18655 | M | M.Vfl233ORFCP (94% identity) | M.Vdi6510MORF18655P | |
| 18660 | ATP-binding protein | |||
| 3480 | ribulose-phosphate 3-epimerase | |||
| 3485 | M | M.Vdi6027FDamP (100% identity) | M.Vdi6510MDamP | |
| 3490 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20085 | type I restriction endonuclease subunit S | |||
| ??? | R | Vco27227McrBP (44% identity) | Vdi6510MMcrBP | |
| 20095 | R | VanT265McrCP (64% identity) | Vdi6510MMcrCP | |
| 20100 | 1132 aa hypothetical protein | |||