Aeromonas caviae R25-2 |
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Putative Aeromonas caviae R25-2 RM systems
Ref: Shi,Y. et al. J Environ Sci (China) (2018) In press
REBASE ref # 26767
| Sequence length: | GenBank #: | |
| Chromosome: | 4,690,132 bp | CP025777 |
| plasmid pAeca1-a: | 228,716 bp | CP039629 |
| plasmid pAsa8-b: | 95,589 bp | CP039630 |
REBASE acronym: AcaR252
Org_num: 29427
All begin C0708_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6095 | DNA primase | |||
| 6100 | M | M.Aca2539II (100% identity) | CAGNNNNNNCTAY | M.AcaR252I |
| 6105 | S | S.Aca2539II (100% identity) | CAGNNNNNNCTAY | S.AcaR252I |
| 6110 | 295 aa hypothetical protein | |||
| 6115 | IS630 family transposase | |||
| 6120 | 96 aa hypothetical protein | |||
| 6125 | R | Aca2539IIP (100% identity) | CAGNNNNNNCTAY | AcaR252IP |
| 6130 | IS21 family transposase ISAs27 | |||
| 9200 | glycine cleavage system protein T | |||
| 9205 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.AcaR252III |
| 9210 | S | S.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | S.AcaR252III |
| 9215 | R | AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | AcaR252IIIP |
| 9220 | ISL3 family transposase | |||
| 17620 | 380 aa hypothetical protein | |||
| 17625 | S | S.Aca2539I (100% identity) | CACNNNNNNCTTT | S.AcaR252II |
| 17630 | M | M.Aca2539I (100% identity) | CACNNNNNNCTTT | M.AcaR252II |
| 17635 | ATP-binding protein | |||
| 17640 | R | Aca2539IP (100% identity) | CACNNNNNNCTTT | AcaR252IIP |
| 17645 | XRE family transcriptional regulator | |||
| plasmid pAeca1-a | ||||
| 22700 | ISL3 family transposase | |||
| 22705 | R | AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | AcaR252IIIP |
| 22710 | S | S.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | S.AcaR252III |
| 22715 | M | M.AmeR5022ORF21625P (100% identity) | GACNNNNNNCGT | M.AcaR252III |
| 22720 | fluoroquinolone-acetylating aminoglycoside | |||
| 23055 | 183 aa hypothetical protein | |||
| 23060 | M | M.SmaY426ORF10P (100% identity) | M.AcaR252ORF23060P | |
| 23065 | DUF1016 domain-containing protein | |||
| 23070 | restriction endonuclease subunit S | |||
| 23075 | R | AmeR5022ORF23120P (100% identity) | AcaR252ORF23060P | |
| 23080 | ISL3-like element ISSm4 family transposase | |||
| 23655 | ISL3 family transposase | |||
| ??? | R | Pci43WORF6200P (83% identity) | AcaR252ORF23660P | |
| ??? | S | S.AmeR5022ORF21625P (38% identity) | S.AcaR252ORF23660P | |
| 22620 | 58 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1585 | cell division protein DamX | |||
| 1590 | M | M.Asp1406DamP (100% identity) | GATC | M.AcaR252Dam |
| 1595 | ribulose-phosphate 3-epimerase | |||
| plasmid pAsa8-b | ||||
| 24050 | 51 aa hypothetical protein | |||
| 24055 | M | M.AveWP8ORF28370P (72% identity) | M.AcaR252ORF24055P | |
| 24060 | 183 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8160 | J domain-containing protein | |||
| 8165 | R | Aca2539ORF17840P (100% identity) | AcaR252ORF8165P | |
| 8170 | class I SAM-dependent methyltransferase | |||