Escherichia coli RTdelA_B_UU3 |
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Putative Escherichia coli RTdelA_B_UU3 RM systems
Ref: Thyer,R. et al. unpublished
REBASE ref # 26834
Complete sequence: 4,644,006 bp
GenBank #: CP023749
REBASE acronym: EcoUU3
Org_num: 29762
All begin CQ840_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23630 | endoribonuclease SymE | |||
| 23635 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoUU3ORF23640P |
| 23640 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoUU3ORF23640P |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | EcoUU3ORF23640P |
| 23650 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10710 | drug/metabolite exporter YedA | |||
| 10715 | V | V.SflFF64DcmP (100% identity) | V.EcoUU3DcmP | |
| 10720 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoUU3DcmP |
| 10725 | phosphohydrolase | |||
| 17640 | Fis family transcriptional regulator | |||
| 17645 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoUU3ORF17645P |
| 17650 | transporter | |||
| 18310 | ribulose-phosphate 3-epimerase | |||
| 18315 | M | adenine-specific DNA-methyltransferase | GATC | M.EcoUU3DamP |
| 18320 | protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6285 | DNA-invertase from lambdoid prophage e14 | |||
| 6290 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoUU3ORF6290P |
| 6295 | isocitrate dehydrogenase | |||
| 23615 | 906 aa hypothetical protein | |||
| 23620 | R | SenHNK130McrCP (100% identity) | EcoUU3McrCP | |
| 23625 | R | SenHNK130McrBP (100% identity) | EcoUU3McrBP | |
| 23630 | endoribonuclease SymE | |||
| ??? | type I restriction-modification system endonuclease | |||
| 23650 | R | SenHNK130MrrP (100% identity) | EcoUU3MrrP | |
| 23655 | GTPase | |||