Glaesserella parasuis 29755 |
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Putative Glaesserella parasuis 29755 RM systems
Ref: Brockmeier,S.L. et al. unpublished
REBASE ref # 26818
Complete sequence: 2,352,603 bp
GenBank #: CP021644
REBASE acronym: Gpa29755
Org_num: 29728
All begin B4U42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 120 | ribosomal RNA small subunit methyltransferase G | |||
| 125 | M | M.HpaST41ORF7145P (100% identity) | GTANNNNNNNCTTG | M.Gpa29755ORF125P |
| 130 | 163 aa hypothetical protein | |||
| 135 | ATP-binding protein | |||
| 140 | R | HpaST41ORF7145P (99% identity) | GTANNNNNNNCTTG | Gpa29755ORF125P |
| 145 | S | S.HpaST41ORF7145P (99% identity) | GTANNNNNNNCTTG | S.Gpa29755ORF125P |
| 150 | DNA damage-inducible protein D | |||
| 745 | transposase | |||
| 750 | M | M.Hpa29755ORF1214P (100% identity) | M.Gpa29755ORF750P | |
| 755 | anticodon nuclease | |||
| 760 | S | S.HpaSH03ORF10045P (44% identity) | S1.Gpa29755ORF750P | |
| 765 | S | S.HpaSH03ORF10045P (52% identity) | S2.Gpa29755ORF750P | |
| 770 | 255 aa hypothetical protein | |||
| 775 | 145 aa hypothetical protein | |||
| 780 | R | Gpa4ORF9940P (99% identity) | Gpa29755ORF750P | |
| 785 | 71 aa hypothetical protein | |||
| 4410 | apolipoprotein N-acyltransferase | |||
| 4415 | R | HpaMNHORF509P (98% identity) | Gpa29755ORF4430P | |
| 4420 | S | S1.HpaST41ORF5205P (99% identity) | S1.Gpa29755ORF4430P | |
| 4425 | S | S.Hpa906ORF3080P (50% identity) | S2.Gpa29755ORF4430P | |
| 4430 | M | M.HpaNagORF693P (99% identity) | M.Gpa29755ORF4430P | |
| 4435 | RNA polymerase sigma factor RpoE | |||
| 6765 | histidinol-phosphate transaminase | |||
| 6770 | R | Hpa29755ORF346P (100% identity) | Gpa29755ORF6785P | |
| 6775 | 212 aa hypothetical protein | |||
| 6780 | S | S.Hpa29755ORF346P (100% identity) | S.Gpa29755ORF6785P | |
| 6785 | M | M.Gpa1818ORF5815P (99% identity) | M.Gpa29755ORF6785P | |
| 6790 | methyltransferase | |||
| 10420 | 121 aa hypothetical protein | |||
| 10425 | S | M.HpaSH03ORF7920P (90% identity) | S.Gpa29755ORF10425P | |
| 10430 | 134 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3520 | DNA repair protein | |||
| 3525 | M | M.Hpa29755ORF686P (100% identity) | M.Gpa29755ORF3525P | |
| 3530 | IS256 family transposase | |||
| 5285 | holin | |||
| 5290 | M | M.Hpa29755ORF1351P (100% identity) | M.Gpa29755ORF5290P | |
| 5295 | 0 aa hypothetical protein | |||
| 7225 | 199 aa hypothetical protein | |||
| ??? | M | M.HpaNagORF227P (100% identity) | M.Gpa29755ORF7230P | |
| 7235 | condensin subunit E | |||
| 8645 | 3-dehydroquinate synthase | |||
| 8650 | M | M.HpaSHDamP (100% identity) | GATC | M.Gpa29755ORF8650P |
| 8655 | sodium-dependent transporter | |||
| 9475 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |||
| 9480 | M | M.HpaST41ORF8905P (100% identity) | M.Gpa29755ORF9480P | |
| 9485 | R | HpaST41ORF8905P (100% identity) | Gpa29755ORF9480P | |
| 9490 | 2-hydroxyacid dehydrogenase | |||
| 10430 | 134 aa hypothetical protein | |||
| 10435 | M | M1.HpaSH03ORF7930P (100% identity) | M1.Gpa29755ORF10435P | |
| 10440 | M | M2.HpaSH03ORF7930P (100% identity) | M2.Gpa29755ORF10435P | |
| 10445 | RM | HpaSH03ORF7930P (100% identity) | Gpa29755ORF10435P | |
| 10450 | PIN domain nuclease | |||
| 10675 | DDE transposase | |||
| 10680 | M | M.Hpa33ORF8359P (100% identity) | M.Gpa29755ORF10680P | |
| 10685 | 799 aa hypothetical protein | |||
| 11075 | 86 aa hypothetical protein | |||
| 11080 | M | M.HphSMORF53P (100% identity) | M.Gpa29755ORF11080P | |
| 11085 | enoyl-CoA hydratase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1525 | ketol-acid reductoisomerase | |||
| 1530 | M | M2.Hpa29755ORF875P (94% identity) | M1.Gpa29755ORF1530P | |
| 1535 | M | M1.Hpa29755ORF875P (100% identity) | M2.Gpa29755ORF1530P | |
| 1540 | R | Hpa29755ORF875P (100% identity) | Gpa29755ORF1530P | |
| 1545 | addiction module protein | |||
| 11040 | 39 aa hypothetical protein | |||
| 11045 | M | M.HpaST41ORF1100P (100% identity) | M.Gpa29755ORF11045P | |
| 11050 | R | HpaST41ORF1100P (100% identity) | Gpa29755ORF11045P | |
| 11055 | DDE transposase | |||