Sphingopyxis species FD7 |
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Putative Sphingopyxis species FD7 RM systems
Ref: Morohoshi,T. et al. unpublished
REBASE ref # 26806
| Sequence length: | GenBank #: | |
| Chromosome: | 3,695,614 bp | AP017898 |
| plasmid pSFD01: | 242,612 bp | AP017899 |
REBASE acronym: SspFD7
Org_num: 29712
All begin SPYCA_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 387 | 279 aa hypothetical protein | |||
| 388 | RM | CnaPQ2ORF15345P (91% identity) | SspFD7ORF388P | |
| 389 | conjugal transfer protein TraD | |||
| 1312 | dihydropteroate synthase | |||
| 1313 | M | M.SalRBORF965P (95% identity) | M.SspFD7ORF1313P | |
| 1314 | short-chain dehydrogenase | |||
| 1505 | 1136 aa hypothetical protein | |||
| ??? | V | V.PmaOXR96SspFP (94% identity) | V.SspFD7ORF1507P | |
| 1507 | M | M.PmaOXR96SspFP (96% identity) | M.SspFD7ORF1507P | |
| 1508 | 73 aa hypothetical protein | |||
| 1516 | 159 aa hypothetical protein | |||
| 1517 | M | M.Bva9239ORF2194P (68% identity) | M.SspFD7ORF1517P | |
| 1518 | 149 aa hypothetical protein | |||
| 1762 | transposase IS3/IS911 | |||
| 1763 | RM | Tpr211ORF17401P (60% identity) | SspFD7ORF1763P | |
| 1764 | 251 aa hypothetical protein | |||
| 2724 | head morphogenesis protein SPP1 gp7 | |||
| 2725 | M | adenine-specific DNA methyltransferase | M.SspFD7ORF2725P | |
| 2726 | 79 aa hypothetical protein | |||
| 2807 | GTP-binding protein LepA | |||
| ??? | RM | SalRBORF2037P (86% identity) | SspFD7ORF2808P | |
| 2810 | 137 aa hypothetical protein | |||
| 2892 | 257 aa hypothetical protein | |||
| ??? | M | M1.SmaEY1ORF21965P (56% identity) | M.SspFD7ORF2894P | |
| 2895 | 61 aa hypothetical protein | |||
| 3189 | 61 aa hypothetical protein | |||
| 3190 | M | M.RcaY262ORF15125P (45% identity) | M.SspFD7ORF3190P | |
| 3191 | Fis family transcriptional regulator | |||
| 3367 | phage integrase family protein | |||
| 3368 | M | M.RspF11ORF4640P (85% identity) | M.SspFD7ORF3368P | |
| 3369 | 84 aa hypothetical protein | |||
| 3491 | DEAD/DEAH box helicase-like | |||
| 3492 | RM | CspEry5ORFCP (75% identity) | SspFD7ORF3492P | |
| 3493 | DEAD/DEAH box helicase-like protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pSFD01 | ||||
| 3732 | 170 aa hypothetical protein | |||
| 3733 | M | M.Lsp66H1ORF2805P (55% identity) | M.SspFD7ORF3733P | |
| 3734 | R | Rba1288ORF11150P (75% identity) | SspFD7ORF3733P | |
| 3735 | 882 aa hypothetical protein | |||