Escherichia coli WCHEC035148 |
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Putative Escherichia coli WCHEC035148 RM systems
Ref: Ma,K. et al. unpublished
REBASE ref # 26757
| Sequence length: | GenBank #: | |
| Chromosome: | 4,695,840 bp | CP029369 |
| Chromosome: | 4,695,840 bp | CP043274 |
| plasmid p1_035148: | 89,248 bp | CP029365 |
| plasmid p1_035148: | 122,305 bp | CP043276 |
| plasmid p2_035148: | 89,248 bp | CP043277 |
| plasmid pQnrS1_035148: | 122,194 bp | CP029368 |
REBASE acronym: Eco35148
Org_num: 29408
All begin DI496_, FYK53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7750 | IS1 family transposase | |||
| 7755 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco35148ORF7765P |
| 7760 | S | S.Eco35125ORF5725P (100% identity) | ACAYNNNNCTG | S.Eco35148ORF7765P |
| 7765 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco35148ORF7765P |
| 7770 | IS3 family transposase | |||
| Chromosome | ||||
| 5775 | IS1 family transposase | |||
| 5780 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco05148ORF5790P |
| 5785 | S | S.Eco35148ORF7765P (100% identity) | ACAYNNNNCTG | S.Eco05148ORF5790P |
| 5790 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco05148ORF5790P |
| 5795 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3590 | protein DamX | |||
| 3595 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco35148DamP |
| 3600 | ribulose-phosphate 3-epimerase | |||
| 4245 | DUF2556 domain-containing protein | |||
| 4250 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco35148ORF4250P |
| 4255 | site-specific integrase | |||
| 11160 | phosphohydrolase | |||
| 11165 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco35148DcmP |
| 11170 | V | V.EcosEC7DcmP (100% identity) | V.Eco35148DcmP | |
| 11175 | drug/metabolite exporter YedA | |||
| 21980 | lysis protein S | |||
| 21985 | M | M.Eco35125ORF19010P (100% identity) | M.Eco35148ORF21985P | |
| 21990 | 67 aa hypothetical protein | |||
| 22020 | LexA family transcriptional regulator | |||
| 22025 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco35148ORF22025P |
| 22030 | PerC family transcriptional regulator | |||
| Chromosome | ||||
| 2465 | DUF2556 domain-containing protein | |||
| 2470 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco05148ORF2470P |
| 2475 | tyrosine-type recombinase/integrase | |||
| 8975 | phosphohydrolase | |||
| 8980 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco05148DcmP |
| 8985 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco05148DcmP |
| 8990 | drug/metabolite exporter YedA | |||
| 19185 | phage lysis protein EssD | |||
| 19190 | M | M.Eco35148ORF21985P (100% identity) | M.Eco05148ORF19190P | |
| 19195 | 67 aa hypothetical protein | |||
| 19225 | LexA family transcriptional regulator | |||
| 19230 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco05148ORF19230P |
| 19235 | PerC family transcriptional regulator | |||
| plasmid p1_035148 | ||||
| 520 | 226 aa hypothetical protein | |||
| 525 | M | M.EcoJS316ORF22690P (100% identity) | M.Eco35148ORF525P | |
| 530 | glutamine--tRNA ligase | |||
| plasmid p1_035148 | ||||
| 23720 | 73 aa hypothetical protein | |||
| 23725 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco05148ORF23725P | |
| 23730 | 102 aa hypothetical protein | |||
| plasmid p2_035148 | ||||
| 24360 | 226 aa hypothetical protein | |||
| 24365 | M | M.EcoJS316ORF22690P (100% identity) | M.Eco05148ORF24365P | |
| 24370 | glutamine--tRNA ligase | |||
| plasmid pQnrS1_035148 | ||||
| 1440 | 73 aa hypothetical protein | |||
| 1445 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco35148ORF1445P | |
| 1450 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15480 | isocitrate dehydrogenase | |||
| 15485 | R | EcosEC27McrCP (100% identity) | Eco35148McrCP | |
| 15490 | R | EcoteDMcrBP (100% identity) | Eco35148McrBP | |
| 15495 | DNA-invertase | |||
| Chromosome | ||||
| 13090 | isocitrate dehydrogenase | |||
| 13095 | R | EcosEC27McrCP (100% identity) | Eco05148McrCP | |
| 13100 | R | EcoteDMcrBP (100% identity) | Eco05148McrBP | |
| 13105 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17155 | replication endonuclease | |||
| 17160 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco35148ORF17160P |
| 17165 | TraR/DksA family transcriptional regulator | |||
| Chromosome | ||||
| 14675 | replication endonuclease | |||
| 14680 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco05148ORF14680P |
| 14685 | TraR/DksA family transcriptional regulator | |||