Mannheimia haemolytica 6055 |
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Putative Mannheimia haemolytica 6055 RM systems
Ref: Beker,M. et al. Front. Microbiol. (2018) In press
REBASE ref # 26794
Complete sequence: 2,689,542 bp
GenBank #: CP029638
REBASE acronym: Mha6055
Org_num: 29676
All begin C4O85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1840 | bifunctional glutamate--cysteine ligase | |||
| 1845 | S | S2.MhaPORFGP (88% identity) | S1.Mha6055ORF1870P | |
| 1850 | integrase | |||
| 1855 | S | S1.Mhas183ORF2125P (48% identity) | S2.Mha6055ORF1870P | |
| 1860 | S | restriction endonuclease subunit S | S3.Mha6055ORF1870P | |
| 1865 | transcriptional regulator | |||
| 1870 | M | M.Pba12565ORF1955P (100% identity) | M.Mha6055ORF1870P | |
| 1875 | R | Pba12565ORF1955P (100% identity) | Mha6055ORF1870P | |
| 1880 | phosphatidylserine decarboxylase | |||
| 4840 | bifunctional [glutamate--ammonia | |||
| 4845 | R | Mhas183ORF4955P (100% identity) | Mha6055ORF4855P | |
| 4850 | S | S.PhaAI (100% identity) | S.Mha6055ORF4855P | |
| 4855 | M | M.MhaBHORF1765P (100% identity) | M.Mha6055ORF4855P | |
| 4860 | 125 aa hypothetical protein | |||
| 10410 | restriction endonuclease subunit S | |||
| 10415 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNNTC | S.Mha6055ORF10420P |
| 10420 | M | M.Pba12565ORF10250P (100% identity) | M.Mha6055ORF10420P | |
| 10425 | methionine synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3570 | 3-dehydroquinate synthase | |||
| 3575 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha6055ORF3575P |
| 3580 | sodium-dependent transporter | |||
| 3810 | 56 aa hypothetical protein | |||
| 3815 | M | M.Pba12565ORF6600P (99% identity) | M.Mha6055ORF3815P | |
| 3820 | DUF4224 domain-containing protein | |||
| 4930 | methyltransferase | |||
| 4935 | M | M.Pba12565ORF6605P (100% identity) | M.Mha6055ORF4935P | |
| 4940 | Com family DNA-binding transcriptional | |||
| 5055 | replication protein | |||
| 5060 | M | M.Pba12565ORF4970P (100% identity) | M.Mha6055ORF5060P | |
| 5065 | hypothetical protein | |||
| 5130 | hypothetical protein | |||
| 5135 | M | M.Pba12565ORF4290P (100% identity) | M.Mha6055ORF5135P | |
| 5140 | 342 aa hypothetical protein | |||
| 6955 | 71 aa hypothetical protein | |||
| 6960 | M | M.Pba12565ORF7080P (100% identity) | M.Mha6055ORF6960P | |
| 6965 | DNA helicase | |||
| 8785 | 69 aa hypothetical protein | |||
| 8790 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha6055ORF8790P |
| 8795 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha6055ORF8790P |
| 8800 | TIR domain-containing protein | |||
| 10535 | S6 family igA-specific metalloendopeptidase | |||
| 10540 | M | M.Pba12565ORF10370P (100% identity) | M.Mha6055ORF10540P | |
| 10545 | 63 aa hypothetical protein | |||
| 12420 | 188 aa hypothetical protein | |||
| 12425 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha6055ORF12425P |
| ??? | RM | MhaPORFCP (100% identity) | CTGAAG | Mha6055ORF12425P |
| 12435 | helicase IV | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5685 | DNA primase | |||
| ??? | R | Mha1584ORF7165P (100% identity) | Mha6055ORFAP | |
| ??? | M | M.MhaPORFJP (100% identity) | M.Mha6055ORFAP | |
| 5710 | DNA methylase N-4/N-6 | |||
| 6635 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| 6640 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha6055ORF6645P |
| 6645 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha6055ORF6645P |
| 6650 | methyltransferase | |||