Salmonella enterica subsp. enterica serovar Thompson NCTC8496 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Thompson NCTC8496 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 4,757,428 bp
GenBank #: LS483493
REBASE acronym: Sen8496
Org_num: 29611
All begin NCTC8496_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4149 | membrane protein | |||
| 4150 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | Sen8496IP |
| 4151 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.Sen8496I |
| 4152 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.Sen8496I |
| 4154 | protein of uncharacterised function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 391 | DamX protein | |||
| 392 | M | M.StyTDamP (100% identity) | GATC | M.Sen8496Dam |
| 393 | ribulose-phosphate 3-epimerase | |||
| 491 | protein yhdU | |||
| 492 | M | M.SenThORF2290P (100% identity) | ATGCAT | M.Sen8496III |
| 493 | Fis DNA-binding protein | |||
| 1956 | metal-dependent phospho hydrolase | |||
| 1957 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen8496DcmP |
| 1958 | V | V.StyUK1DcmP (100% identity) | V.Sen8496DcmP | |
| 1959 | inner membrane transporter yedA | |||
| 4180 | Uncharacterised protein | |||
| ??? | R | Spy5740IVP (100% identity) | GGTACC | Sen8496IVP |
| 4182 | M | M.Spy5740IV (100% identity) | GGTACC | M.Sen8496IV |
| 4183 | phage membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3662 | cytoplasmic protein | |||
| ??? | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen8496IIP |
| 3665 | M | M.Spy5740II (100% identity) | CAGAG | M.Sen8496II |
| 3666 | metabolite transport protein | |||