Haemophilus influenzae NCTC12194 |
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Putative Haemophilus influenzae NCTC12194 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 1,915,356 bp
GenBank #: LS483486
REBASE acronym: Hin12194
Org_num: 29647
All begin NCTC12194_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 905 | inner membrane protein | |||
| 906 | R | HinNTHORFRP (100% identity) | TTTANNNNNNNGTT | Hin12194IP |
| 907 | DNA binding protein | |||
| 908 | anticodon nuclease | |||
| 909 | S | S.HinKR271ORF774P (100% identity) | TTTANNNNNNNGTT | S.Hin12194I |
| 910 | M | M.Hin8455ORF881P (98% identity) | TTTANNNNNNNGTT | M.Hin12194I |
| 911 | oligopeptidase A | |||
| 1068 | Signal Recognition Particle (SRP) component with | |||
| 1069 | R | HinP3EMOORF6585P (99% identity) | Hin12194ORF1073P | |
| 1070 | S | type I site-specific restriction-modification | S1.Hin12194ORF1073P | |
| 1071 | S | S.HinNTHORFYP (58% identity) | S2.Hin12194ORF1073P | |
| 1072 | transcriptional regulator containing an hth | |||
| 1073 | M | M.HinII4ORF8830P (100% identity) | M.Hin12194ORF1073P | |
| 1074 | NIF3-like protein | |||
| 1402 | translation initiation factor IF-2 | |||
| ??? | R | HinII4ORF13410P (99% identity) | Hin12194ORF1409P | |
| 1405 | Uncharacterised protein | |||
| 1406 | Uncharacterised protein | |||
| 1407 | FRG domain | |||
| 1408 | S | S.HinII6ORF13220P (62% identity) | S.Hin12194ORF1409P | |
| ??? | M | M.Hin25588ORFFP (93% identity) | M.Hin12194ORF1409P | |
| 1411 | 30s ribosome binding factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 658 | Protein of uncharacterised function (DUF551) | |||
| ??? | M | M.HinP3EMOORF5240P (98% identity) | M.Hin12194ORF659P | |
| 661 | Uncharacterised protein | |||
| 670 | Uncharacterised protein | |||
| 671 | M | M.HinY40ORF16330P (100% identity) | M.Hin12194ORF671P | |
| 672 | phage antirepressor protein | |||
| 683 | Replication protein P | |||
| 684 | M | M.Hin1121ORF3455P (97% identity) | M.Hin12194ORF684P | |
| 685 | Protein of uncharacterised function (DUF1367) | |||
| 727 | mu com-like protein | |||
| 728 | M | M.HinH1ORF9450P (100% identity) | BA | M.Hin12194ORF728P |
| 729 | Uncharacterised protein | |||
| 1013 | Uncharacterised protein | |||
| 1014 | M | M.HinII8ORF9030P (96% identity) | M.Hin12194ORF1014P | |
| 1015 | Antitoxin HicB | |||
| 1452 | condesin subunit F | |||
| 1453 | M | M.HinKR271ORF1213P (99% identity) | RGCGCY | M.Hin12194ORF1453P |
| 1454 | R | HinP3EMOORF3885P (100% identity) | RGCGCY | Hin12194ORF1453P |
| 1455 | protein involved in chromosome partitioning | |||
| 1511 | Protein of uncharacterised function DUF262 | |||
| 1512 | R | Hin1413ORF3065P (99% identity) | Hin12194ORF1513P | |
| 1513 | M | M.HinP3EMOORF4195P (99% identity) | M.Hin12194ORF1513P | |
| 1514 | Uncharacterized conserved protein | |||
| 1519 | prophage antirepressor | |||
| 1520 | M | M.HinY40ORF16330P (100% identity) | M.Hin12194ORF1520P | |
| 1521 | Uncharacterised protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1908 | ribonuclease HII, degrades RNA of DNA-RNA | |||
| 1909 | M | M.HinIII3ORF16370P (100% identity) | CAKAC | M.Hin12194II |
| 1910 | R | HinV3ORF18120P (97% identity) | CAKAC | Hin12194IIP |
| 1911 | gamma-carboxymuconolactone decarboxylase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 915 | phosphatidylglycerophosphatase B | |||
| 916 | M | M.HinP3EMOORF7155P (100% identity) | GATC | M.Hin12194ORF916P |
| 917 | 3-dehydroquinate synthase | |||