Salmonella enterica NCTC10436 |
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Putative Salmonella enterica NCTC10436 RM systems
Ref: Doyle,S. unpublished
REBASE ref # 22501
Complete sequence: 4,787,620 bp
GenBank #: LS483428
REBASE acronym: Sen10536
Org_num: 29561
All begin NCTC10436_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3943 | restriction endonuclease | |||
| 3944 | R | SenCAD1ORF19765P (98% identity) | GAYANNNNNNNNCTGG | Sen10536VP |
| 3945 | M | M.Cwe364I (98% identity) | GAYANNNNNNNNCTGG | M.Sen10536V |
| 3946 | S | S.Csp5362ORF18530P (71% identity) | GAYANNNNNNNNCTGG | S.Sen10536V |
| 3947 | protein of uncharacterised function | |||
| 4169 | Uncharacterised protein | |||
| 4172 | S | S.Sen59899ORF3715P (59% identity) | CCYANNNNNNTGG | S.Sen10536VI |
| 4173 | M | M.CbrDY2019ORF3865P (96% identity) | CCYANNNNNNTGG | M.Sen10536VI |
| 4174 | R | Sen59899ORF3715P (97% identity) | CCYANNNNNNTGG | Sen10536VIP |
| 4175 | DNA-binding transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 360 | DamX protein | |||
| 361 | M | M.Sen59891DamP (100% identity) | M.Sen10536DamP | |
| 362 | ribulose-phosphate 3-epimerase | |||
| 468 | protein yhdU | |||
| 469 | M | M.SenST114ORF2440P (98% identity) | ATGCAT | M.Sen10536II |
| 470 | Fis DNA-binding protein | |||
| 677 | gp91 | |||
| 678 | M | M.SenST203ORF4380P (99% identity) | M.Sen10536ORF678P | |
| 679 | Phage replication protein | |||
| 1871 | metal-dependent phospho hydrolase | |||
| 1872 | M | M.Ssp918DcmP (98% identity) | CCWGG | M.Sen10536DcmP |
| 1873 | V | V.SenS2039DcmP (98% identity) | V.Sen10536DcmP | |
| 1874 | inner membrane transporter yedA | |||
| 1924 | Uncharacterised protein | |||
| ??? | M | M2.CamCA71ORF16175P (74% identity) | M.Sen10536ORF1925P | |
| 1926 | Uncharacterised protein | |||
| 3984 | phage polarity suppression protein | |||
| 3985 | R | Ceu1490ORF2315P (95% identity) | CAGCTG | Sen10536IIIP |
| ??? | C | C.Ceu1490ORF2315P (97% identity) | C.Sen10536IIIP | |
| 3986 | M | M.Ceu1490ORF2315P (97% identity) | CAGCTG | M.Sen10536III |
| 3987 | Integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3507 | cytoplasmic protein | |||
| 3508 | R | SenSe29ORF17380P (98% identity) | CAGAG | Sen10536IP |
| 3509 | M | M.SensS499ORF18165P (99% identity) | CAGAG | M.Sen10536I |
| 3510 | metabolite transport protein | |||
| 3977 | ATP-dependent helicase | |||
| 3978 | M | M.Sens24184ORF18745P (95% identity) | GAGCC | M.Sen10536IV |
| 3979 | R | Sen00356ORF4240P (97% identity) | GAGCC | Sen10536IVP |
| 3980 | Uncharacterised protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3942 | Uncharacterised protein | |||
| 3943 | R | SenST114MrrP (99% identity) | Sen10536MrrP | |
| 3944 | type I restriction enzyme EcoEI R protein | |||