Helicobacter cinaedi P01D0000 |
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Putative Helicobacter cinaedi P01D0000 RM systems
Ref: Gotoh,Y. et al. unpublished
REBASE ref # 26658
Complete sequence: 2,154,041 bp
GenBank #: AP018676
REBASE acronym: HciP01D
Org_num: 29477
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | 304 aa hypothetical protein, possible restriction endonuclease | |||
| ??? | S | S.Hci60917ORF9650P (91% identity) | S.HciP01DORFHP | |
| ??? | M | M.Hci60917ORF9650P (100% identity) | M.HciP01DORFHP | |
| ??? | R | Hci60917ORF9650P (98% identity) | HciP01DORFHP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Hci60917ORF50P (98% identity) | HciP01DORFAP | |
| ??? | M | M.HciORF386P (100% identity) | M.HciP01DORFBP | |
| ??? | 423 aa hypothetical protein | |||
| ??? | R | Hci611ORF451P (100% identity) | HciP01DORFZP | |
| ??? | M | M.HciORF474P (100% identity) | M.HciP01DORFZP | |
| ??? | adenine specific DNA methyltransferase | |||
| ??? | M | M.Hci798ORFSP (99% identity) | M.HciP01DORFVP | |
| ??? | NgoFVII family restriction endonuclease | |||
| ??? | M | M.Hci60917ORF6105P (100% identity) | M.HciP01DORFUP | |
| ??? | DNA cytosine methyltransferase | |||
| ??? | DNA cytosine methyltransferase | |||
| ??? | R | Hci629ORFQP (100% identity) | HciP01DORFXP | |
| ??? | M | M.Hci60917ORF6080P (100% identity) | M.HciP01DORFXP | |
| ??? | type II restriction endonuclease MboI | |||
| ??? | DNA -methyltransferase | |||
| ??? | R | Hci60917ORF6060P (100% identity) | HciP01DORFYP | |
| ??? | M | M.Hci611ORF1174P (100% identity) | M.HciP01DORFYP | |
| ??? | R | Hci798ORFBP (100% identity) | HciP01DORFSP | |
| ??? | M | M.Hci629ORFSP (99% identity) | M.HciP01DORFSP | |
| ??? | DNA methyltransferase | |||
| ??? | SAM-dependent methyltransferase | |||
| ??? | M | M.Hci629ORFRP (100% identity) | M.HciP01DORFTP | |
| ??? | R | Hci629ORFRP (100% identity) | HciP01DORFTP | |
| ??? | M | M.Hci60917ORF5345P (92% identity) | M.HciP01DORFCP | |
| ??? | RM | Hci197ORF9690P (100% identity) | HciP01DORFRP | |
| ??? | RM | Hci629ORFUP (81% identity) | HciP01DORFQP | |
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hci197ORF7770P (100% identity) | HciP01DORFPP | |
| ??? | R | Hci197ORF7575P (100% identity) | HciP01DORFDP | |
| ??? | M | M.Hci197ORF7575P (100% identity) | M.HciP01DORFDP | |
| ??? | RM | Hci60917ORF7405P (100% identity) | HciP01DORFEP | |
| ??? | RM | Hci60917ORF8120P (84% identity) | HciP01DORFNP | |
| ??? | R | Hci60917ORF8260P (100% identity) | HciP01DORFLP | |
| ??? | M | M1.Hci629ORFJP (47% identity) | M1.HciP01DORFLP | |
| ??? | M | M2.Hci629ORFJP (100% identity) | M2.HciP01DORFLP | |
| ??? | 575 aa hypothetical protein | |||
| ??? | site-specific DNA-methyltransferase | |||
| ??? | R | Hci60917ORF8285P (100% identity) | HciP01DORFMP | |
| ??? | M | M.HciORF1958P (100% identity) | M.HciP01DORFMP | |
| ??? | M | M.Hci798ORFKP (100% identity) | M.HciP01DORFFP | |
| ??? | R | Hci60917ORF8655P (100% identity) | HciP01DORFFP | |
| ??? | DEAD/DEAH box helicase | |||
| ??? | M | M1.Hci60917ORF9240P (100% identity) | M1.HciP01DORFJP | |
| ??? | M | M2.Hci197ORF4270P (100% identity) | M2.HciP01DORFJP | |
| ??? | R | Hci197ORF4270P (100% identity) | HciP01DORFJP | |
| ??? | DNA methyltransferase | |||
| ??? | AlwI family type II restriction endonuclease | |||
| ??? | M | M.CupORF1468P (20% identity) | M1.HciP01DORFKP | |
| ??? | M | M.Hci197ORF4255P (77% identity) | M2.HciP01DORFKP | |
| ??? | R | Hci197ORF4255P (100% identity) | HciP01DORFKP | |
| ??? | R | HciORF2273P (100% identity) | HciP01DORFGP | |
| ??? | M | M.HciORF2273P (100% identity) | M.HciP01DORFGP | |
| ??? | 493 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hci60917ORF215P (100% identity) | M.HciP01DORFB1P | |
| ??? | R | Hci197ORF7775P (100% identity) | HciP01DORFOP | |
| ??? | M | M.Hci60917ORF6715P (100% identity) | M.HciP01DORFOP | |
| ??? | Uncharacterised protein | |||
| ??? | M | M.HciORF2191P (100% identity) | M.HciP01DORFIP | |
| ??? | R | Hci60917ORF9220P (99% identity) | HciP01DORFIP | |
| ??? | DNA methyltransferase | |||