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Putative Escherichia coli SD134209 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 26756
Sequence length: | GenBank #: | |
Chromosome: | 5,359,785 bp | CP029692 |
plasmid pSD134209-1: | 188,342 bp | CP029690 |
REBASE acronym: Eco134209
Org_num: 29407
All begin DL800_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3290 | IS3 family transposase | |||
3295 | M | M.Ecos32ORF15460P (100% identity) | M.Eco134209ORF3295P | |
3300 | R | Ecos32ORF15460P (100% identity) | Eco134209ORF3295P | |
3305 | 119 aa hypothetical protein | |||
8975 | lipoprotein | |||
8980 | M | M.EcoE2863ORF1308P (100% identity) | M.Eco134209ORF8980P | |
8995 | 61 aa hypothetical protein | |||
9235 | phosphohydrolase | |||
9240 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco134209DcmP |
9245 | V | V.SsoSE61DcmP (100% identity) | V.Eco134209DcmP | |
9250 | drug/metabolite exporter YedA | |||
13330 | 329 aa hypothetical protein | |||
13335 | M | M.Ecos15739ORF2910P (100% identity) | M.Eco134209ORF13335P | |
13340 | 81 aa hypothetical protein | |||
14160 | DUF1737 domain-containing protein | |||
14165 | M | M.EcoE2863ORF1482P (100% identity) | M.Eco134209ORF14165P | |
14170 | TrmB family transcriptional regulator | |||
15720 | NinE family protein | |||
15725 | M | M.EcoE2863ORF2546P (100% identity) | GATC | M.Eco134209ORF15725P |
15730 | recombination protein NinB | |||
19755 | NinE family protein | |||
19760 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco134209ORF19760P |
19765 | recombination protein NinB | |||
23675 | Fis family transcriptional regulator | |||
23680 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco134209ORF23680P |
23685 | DUF2556 domain-containing protein | |||
24270 | ribulose-phosphate 3-epimerase | |||
24275 | M | DNA adenine methylase | GATC | M.Eco134209DamP |
24280 | protein DamX | |||
28090 | 138 aa hypothetical protein | |||
28095 | M | M.EcoLSU61ORF26180P (100% identity) | M.Eco134209ORF28095P | |
28100 | Eae protein | |||
29695 | BREX-1 system phosphatase PglZ type A | |||
29700 | RM | EcoFP2ORF70P (100% identity) | CRARCAG | Eco134209ORF29700P |
29705 | BREX system P-loop protein BrxC | |||
plasmid pSD134209-1 | ||||
515 | 56 aa hypothetical protein | |||
520 | M | M.Eco268ORF635P (100% identity) | M.Eco134209ORF520P | |
525 | thermonuclease family protein | |||
1075 | DNA-binding protein | |||
1080 | M | M.Eco268ORF295P (100% identity) | M.Eco134209ORF1080P | |
1085 | 273 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18010 | NinE family protein | |||
18015 | M | M.EcoST02ORF28140P (100% identity) | GATC | M.Eco134209ORF18015P |
18020 | endonuclease | |||
18180 | 76 aa hypothetical protein | |||
18185 | M | M.EcoST02ORF28480P (100% identity) | GATC | M.Eco134209ORF18185P |
18190 | DUF1382 domain-containing protein |