Escherichia coli CCUG 70745 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli CCUG 70745 RM systems
Ref: Johnning,A. et al. unpublished
REBASE ref # 26753
| Sequence length: | GenBank #: | |
| Chromosome: | 5,074,278 bp | CP023258 |
| plasmid pEco70745_1: | 107,423 bp | CP023259 |
REBASE acronym: Eco70745
Org_num: 29400
All begin CLH66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20670 | 400 aa hypothetical protein | |||
| 20675 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.Eco70745ORF20675P |
| 20680 | anticodon nuclease | |||
| 20685 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.Eco70745ORF20675P |
| 20690 | ATP-dependent DNA helicase RecG | |||
| 20695 | histidinol-phosphatase | |||
| 20700 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | Eco70745ORF20675P |
| 20705 | DNA-binding protein | |||
| plasmid pEco70745_1 | ||||
| 26685 | glycosyl transferase | |||
| 26690 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNCTGG | Eco70745ORF26700P |
| 26695 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.Eco70745ORF26700P |
| ??? | M | M.Ecos2020ORFGP (100% identity) | CAAYNNNNNCTGG | M.Eco70745ORF26700P |
| 26705 | type II toxin-antitoxin system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 405 | PerC family transcriptional regulator | |||
| 410 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco70745ORF410P |
| 415 | LexA family transcriptional regulator | |||
| 7980 | TrmB family transcriptional regulator | |||
| 7985 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco70745ORF7985P |
| 8000 | 108 aa hypothetical protein | |||
| 11520 | drug/metabolite exporter YedA | |||
| 11525 | V | V.SsoSE61DcmP (100% identity) | V.Eco70745DcmP | |
| 11530 | M | M.Ecoi648DcmP (100% identity) | CCWGG | M.Eco70745DcmP |
| 11535 | phosphohydrolase | |||
| 15000 | PerC family transcriptional regulator | |||
| 15005 | M | M.SspPIBORF6330P (100% identity) | M.Eco70745ORF15005P | |
| 15010 | 64 aa hypothetical protein | |||
| 19550 | Fis family transcriptional regulator | |||
| 19555 | M | M.Ecos142ORF2405P (100% identity) | M.Eco70745ORF19555P | |
| 19560 | transporter | |||
| 20115 | ribulose-phosphate 3-epimerase | |||
| 20120 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco70745DamP |
| 20125 | cell division protein DamX | |||
| 24645 | PerC family transcriptional regulator | |||
| 24650 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco70745ORF24650P |
| 24655 | LexA family transcriptional regulator | |||
| plasmid pEco70745_1 | ||||
| 26575 | 73 aa hypothetical protein | |||
| 26580 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco70745ORF26580P |
| 26585 | 0 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26290 | pilus assembly protein | |||
| 26295 | M | M.SflN116ORF19490P (52% identity) | M.Eco70745ORF26295P | |
| 26300 | R | type III restriction endonuclease subunit R | Eco70745ORF26295AP | |
| 26305 | IS1380 family transposase | |||
| 26310 | 71 aa hypothetical protein | |||
| 26315 | LuxR family transcriptional regulator | |||
| 26320 | quaternary ammonium compound-resistance protein | |||
| 26325 | 177 aa hypothetical protein | |||
| 26330 | class C beta-lactamase CMY-6 | |||
| 5 | 24 aa hypothetical protein | |||
| 10 | tryptophan synthase subunit beta like protein | |||
| 15 | R | Ecoi648ORF4147P (97% identity) | Eco70745ORF26295BP | |
| 20 | 100 aa hypothetical protein | |||