Acidiferrobacter species SPIII_3 |
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Putative Acidiferrobacter species SPIII_3 RM systems
Ref: Thyssen,C. et al. unpublished
REBASE ref # 26715
Complete sequence: 3,398,398 bp
GenBank #: CP027663
REBASE acronym: Ath1880
Org_num: 29298
All begin C4901_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9185 | HicB family protein | |||
| 9190 | R | UbaMDORFJ8P (55% identity) | Ath1880ORF9225P | |
| 9195 | 251 aa hypothetical protein | |||
| 9200 | DUF4357 domain-containing protein | |||
| 9205 | 228 aa hypothetical protein | |||
| 9210 | 275 aa hypothetical protein | |||
| 9215 | S | S.Dgi1382ORF1296P (43% identity) | S.Ath1880ORF9225P | |
| 9220 | 181 aa hypothetical protein | |||
| ??? | M | M.Ath1880ORF11115P (77% identity) | M.Ath1880ORF9225P | |
| 9250 | 556 aa hypothetical protein | |||
| 11110 | 169 aa hypothetical protein | |||
| 11115 | M | M.Ath1880ORF9225P (77% identity) | M.Ath1880ORF11115P | |
| 11120 | 0 aa hypothetical protein | |||
| 12335 | host attachment protein | |||
| ??? | M | M.Bdi361ORF3005P (64% identity) | M.Ath1880ORF12350P | |
| 12355 | 180 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2095 | 446 aa hypothetical protein | |||
| 2100 | M | M.UbaMDORFP9P (79% identity) | M.Ath1880ORF2100P | |
| 2105 | 201 aa hypothetical protein | |||
| 10960 | site-specific integrase | |||
| 10965 | RM | SspCFD1ORFCP (72% identity) | Ath1880ORF10965P | |
| 10970 | DEAD/DEAH box helicase | |||
| 11445 | 158 aa hypothetical protein | |||
| ??? | RM | Res668ORF22455P (62% identity) | Ath1880ORF11450P | |
| 11455 | DEAD/DEAH box helicase | |||
| 12360 | 125 aa hypothetical protein | |||
| 12365 | M | M.UbaMDORFF11P (63% identity) | M.Ath1880ORF12365P | |
| 12370 | R | UbaMDORFF11P (74% identity) | Ath1880ORF12365P | |
| 12375 | 153 aa hypothetical protein | |||
| 16885 | YihA family ribosome biogenesis GTP-binding | |||
| 16890 | R | TspQ5ORF16710P (68% identity) | Ath1880ORF16895P | |
| 16895 | M | M.PboPX4ORF2194P (51% identity) | M.Ath1880ORF16895P | |
| 16900 | 66 aa hypothetical protein | |||