Salmonella enterica DA34837 |
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Putative Salmonella enterica DA34837 RM systems
Ref: Nicoloff,H. et al. unpublished
REBASE ref # 26701
Complete sequence: 5,070,296 bp
GenBank #: CP029568
REBASE acronym: Sen34837
Org_num: 29270
All begin DLJ72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2050 | endoribonuclease SymE | |||
| 2055 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen34837ORF2060P |
| 2060 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen34837ORF2060P |
| 2065 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen34837ORF2060P |
| 2070 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1880 | 363 aa hypothetical protein | |||
| 1885 | RM | StyUK1IV (100% identity) | GATCAG | Sen34837ORF1885P |
| 1890 | BREX system P-loop protein BrxC | |||
| 13085 | drug/metabolite exporter YedA | |||
| 13090 | V | V.StyUK1DcmP (100% identity) | V.Sen34837DcmP | |
| 13095 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen34837DcmP |
| 13100 | phosphohydrolase | |||
| 13350 | RusA family crossover junction | |||
| 13355 | M | M.Ssp17155ORFIP (100% identity) | M.Sen34837ORF13355P | |
| 13360 | PerC family transcriptional regulator | |||
| 16860 | 0 aa hypothetical protein | |||
| 16865 | M | M.StyTORF1914P (100% identity) | M.Sen34837ORF16865P | |
| 16870 | ead/Ea22-like family protein | |||
| 17525 | 95 aa hypothetical protein | |||
| 17530 | M | M.Sdy96265ORFEP (99% identity) | M.Sen34837ORF17530P | |
| 17535 | 216 aa hypothetical protein | |||
| 18050 | thermonuclease family protein | |||
| 18055 | M | M.StyCORF187P (49% identity) | M.Sen34837ORF18055P | |
| 18060 | AraC family transcriptional regulator | |||
| 20640 | replication endonuclease | |||
| 20645 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen34837ORF20645P | |
| 20650 | DUF2732 domain-containing protein | |||
| 21620 | Fis family transcriptional regulator | |||
| 21625 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen34837ORF21625P |
| 21630 | DUF2556 domain-containing protein | |||
| 22140 | ribulose-phosphate 3-epimerase | |||
| 22145 | M | M.StyTDamP (100% identity) | GATC | M.Sen34837DamP |
| 22150 | SPOR domain-containing protein | |||
| 26255 | PerC family transcriptional regulator | |||
| 26260 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen34837ORF26260P |
| 26265 | LexA family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4475 | MFS transporter | |||
| 4480 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen34837ORF4480P |
| 4485 | R | StyUK1IP (99% identity) | CAGAG | Sen34837ORF4480P |
| 4490 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2065 | type I restriction-modification system | |||
| 2070 | R | StyUK1MrrP (100% identity) | Sen34837MrrP | |
| 2075 | 95 aa hypothetical protein | |||