|
Putative Orientia tsutsugamushi RM systems
Ref: Batty,M.E. and Batty M,E. unpublished
REBASE ref # 26552
Sequence length: | GenBank #: | |
chromosome I: | 2,254,553 bp | LS398549 |
chromosome I: | 1,932,116 bp | LS398547 |
chromosome I: | 2,469,803 bp | LS398548 |
chromosome I: | 2,319,449 bp | LS398550 |
chromosome I: | 2,078,193 bp | LS398552 |
REBASE acronym:
Org_num:
All begin KARP_, KATO_, TA686_, UT176_, UT76HP_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
186 | membrane protein | |||
187 | M | DNA methyltransferase | M.Ots686ORF187P | |
188 | ATP-binding protein | |||
432 | ATP-binding protein | |||
433 | M | M.Ots686ORF1277P (100% identity) | M.Ots686ORF433P | |
434 | membrane protein | |||
494 | membrane protein | |||
495 | M | M.Ots2014ORF3455P (98% identity) | M.Ots686ORF495P | |
496 | Uncharacterised protein | |||
570 | membrane protein | |||
571 | M | M.Ots686ORF886P (100% identity) | M.Ots686ORF571P | |
572 | Uncharacterised protein | |||
885 | membrane protein | |||
886 | M | M.Ots686ORF571P (100% identity) | M.Ots686ORF886P | |
887 | Uncharacterised protein | |||
934 | ATP-binding protein | |||
935 | M | M.Ots686ORF886P (99% identity) | M.Ots686ORF935P | |
936 | membrane protein | |||
1276 | ATP-binding protein | |||
1277 | M | M.Ots686ORF433P (100% identity) | M.Ots686ORF1277P | |
1278 | membrane protein | |||
1315 | ATP-binding protein | |||
??? | M | M.OtsKatoORF31P (100% identity) | M.Ots686ORF1316P | |
1317 | membrane protein | |||
1452 | replicative DNA helicase | |||
1453 | M | M.OtsGORF2037P (84% identity) | M.Ots686ORF1453P | |
1454 | Uncharacterised protein | |||
1515 | membrane protein | |||
1516 | M | M.Ots686ORF886P (100% identity) | M.Ots686ORF1516P | |
1517 | Uncharacterised protein | |||
1618 | ATP-binding protein | |||
1619 | M | M.OtsKatoORF1649P (95% identity) | M.Ots686ORF1619P | |
1620 | Uncharacterised protein | |||
1687 | Uncharacterised protein | |||
1688 | M | M.OtsGORF2037P (41% identity) | M.Ots686ORF1688P | |
1689 | transposase | |||
2174 | ATP-binding protein | |||
2175 | M | DNA methyltransferase | M.Ots686ORF2175P | |
2176 | Uncharacterised protein | |||
2242 | Uncharacterised protein | |||
2243 | M | M.Ots686ORF886P (100% identity) | M.Ots686ORF2243P | |
2244 | membrane protein | |||
2457 | ATP-binding protein | |||
2458 | M | M.OtssGORF948P (99% identity) | M.Ots686ORF2458P | |
2459 | membrane protein | |||
chromosome I | ||||
84 | Uncharacterised protein | |||
85 | M | M.OtsUT76ORF3791P (100% identity) | M.Ots176ORF85P | |
86 | membrane protein | |||
251 | ATP-binding protein | |||
252 | M | M.OtssGORF948P (99% identity) | M.Ots176ORF252P | |
253 | membrane protein | |||
367 | IS630 family transposase | |||
368 | M | DNA methyltransferase | M.Ots176ORF368P | |
369 | membrane protein | |||
469 | membrane protein | |||
470 | M | M.OtsKarpORF1824P (100% identity) | M.Ots176ORF470P | |
471 | ATP-binding protein | |||
581 | IS630 family transposase | |||
582 | M | M.OtsUT76ORF2003P (100% identity) | M.Ots176ORF582P | |
583 | ATP-binding protein | |||
836 | ATP-binding protein | |||
837 | M | M.OtsUT76ORF3602P (100% identity) | M.Ots176ORF1931P | |
838 | membrane protein | |||
880 | IS630 family transposase | |||
881 | M | M.OtsUT76ORF3791P (100% identity) | M.Ots176ORF881P | |
882 | membrane protein | |||
991 | Uncharacterised protein | |||
992 | M | M.Ots716ORF1436P (99% identity) | M.Ots176ORF992P | |
993 | membrane protein | |||
1025 | ATP-binding protein | |||
1026 | M | M.OtsUT76ORF3602P (100% identity) | M.Ots176ORF1026P | |
1027 | membrane protein | |||
1222 | IS630 family transposase | |||
1223 | M | M.OtsUT76ORF3072P (100% identity) | M.Ots176ORF1223P | |
1224 | membrane protein | |||
1254 | IS630 family transposase | |||
1255 | M | M.OtsUT76ORF3791P (100% identity) | M.Ots176ORF1255P | |
1256 | membrane protein | |||
1615 | ATP-binding protein | |||
??? | M | M.OtsKatoORF1649P (100% identity) | M.Ots176ORF1616P | |
1617 | Uncharacterised protein | |||
1765 | membrane protein | |||
1766 | M | M.Ots76ORF1247P (99% identity) | M.Ots176ORF1766P | |
1767 | Uncharacterised protein | |||
1980 | membrane protein | |||
1981 | M | M.OtssGORF2245P (100% identity) | M.Ots176ORF1981P | |
1982 | ATP-binding protein | |||
chromosome I | ||||
23 | ATP-binding protein | |||
24 | M | M.OtsKatoORF781P (38% identity) | M.OtsKarpORF24P | |
25 | Uncharacterised protein | |||
136 | Uncharacterised protein | |||
??? | M | M.OtsKaORFUP (100% identity) | M.OtsKarpORF137P | |
138 | membrane protein | |||
159 | membrane protein | |||
??? | M | M.OtsKaORFA1P (100% identity) | M.OtsKarpORF160P | |
161 | Uncharacterised protein | |||
216 | ATP-binding protein | |||
217 | M | M.OtsKarpORF2437P (100% identity) | M.OtsKarpORF217P | |
218 | RNA-binding protein | |||
393 | ATP-binding protein | |||
??? | M | M.OtsKaORFSP (100% identity) | M.OtsKarpORF394P | |
395 | membrane protein | |||
492 | ATP-binding protein | |||
??? | M | M.OtsKaORFAP (100% identity) | M.OtsKarpORF493P | |
494 | membrane protein | |||
519 | membrane protein | |||
??? | M | M.OtsKatoORF31P (100% identity) | M.OtsKarpORF520P | |
521 | ATP-binding protein | |||
759 | ATP-binding protein | |||
760 | M | M.OtsKarpORF217P (100% identity) | M.OtsKarpORF2437P | |
761 | RNA-binding protein | |||
770 | membrane protein | |||
??? | M | M.OtsKatoORF31P (100% identity) | M.OtsKarpORF771P | |
772 | ATP-binding protein | |||
826 | transposase | |||
??? | M | M.OtsKatoORF1649P (100% identity) | M.OtsKarpORF827P | |
828 | ATP-binding protein | |||
957 | membrane protein | |||
958 | M | M.OtsKarpORF2057P (83% identity) | M.OtsKarpORF958P | |
959 | Uncharacterised protein | |||
1066 | ATP-binding protein | |||
??? | M | M.OtsKatoORF449P (100% identity) | M.OtsKarpORF1067P | |
1068 | membrane protein | |||
1293 | membrane protein | |||
??? | M | M.OtsKatoORF449P (100% identity) | M.OtsKarpORF1294P | |
1295 | ATP-binding protein | |||
1395 | conjugal transfer protein TraC | |||
1396 | M | DNA methyltransferase | M.OtsKarpORF1396P | |
1397 | Uncharacterised protein | |||
1419 | membrane protein | |||
1420 | M | M.Ots176ORF470P (100% identity) | M.OtsKarpORF1824P | |
1421 | ATP-binding protein | |||
1537 | membrane protein | |||
??? | M | M.OtsKaORFHP (100% identity) | M.OtsKarpORF1538P | |
1539 | ATP-binding protein | |||
1642 | membrane protein | |||
??? | M | M.OtsKatoORF449P (100% identity) | M.OtsKarpORF1643P | |
1644 | IS5 family transposase ISOt6 | |||
1688 | ATP-binding protein | |||
1689 | M | M.OtsSidoORF86P (100% identity) | M.OtsKarpORF1689P | |
1690 | membrane protein | |||
1699 | membrane protein | |||
??? | M | M.OtsKatoORF1649P (100% identity) | M.OtsKarpORF1700P | |
1701 | ATP-binding protein | |||
1740 | ATP-binding protein | |||
1741 | M | M.OtsKarpORF1949P (100% identity) | M.OtsKarpORF1741P | |
1742 | membrane protein | |||
1797 | ATP-binding protein | |||
1798 | M | M.OtsKarpORF1949P (100% identity) | M.OtsKarpORF1798P | |
1799 | membrane protein | |||
1884 | ankyrin repeat-containing protein | |||
??? | M | M.OtsKaORFRP (100% identity) | M.OtsKarpORF1885P | |
1886 | ATP-binding protein | |||
1948 | membrane protein | |||
1949 | M | M.OtsKarpORF1798P (100% identity) | M.OtsKarpORF1949P | |
1950 | ATP-binding protein | |||
2056 | membrane protein | |||
??? | M | M.OtsKaORFWP (100% identity) | M.OtsKarpORF2057P | |
2058 | Uncharacterised protein | |||
2454 | membrane protein | |||
??? | M | M.OtsKaORFPP (100% identity) | M.OtsKarpORF2455P | |
2456 | ATP-binding protein | |||
2513 | ankyrin repeat-containing protein | |||
??? | M | M.OtsKaORFTP (100% identity) | M.OtsKarpORF2514P | |
2515 | membrane protein | |||
2554 | membrane protein | |||
2555 | M | M.OtsSidoORF86P (100% identity) | M.OtsKarpORF2555P | |
2556 | ATP-binding protein | |||
chromosome I | ||||
30 | membrane protein | |||
??? | M | M.OtsKarpORF771P (100% identity) | M.OtsKatoORF31P | |
32 | ATP-binding protein | |||
142 | ATP-binding protein | |||
143 | M | M.OtsKatoORF781P (99% identity) | M.OtsKatoORF143P | |
144 | membrane protein | |||
198 | membrane protein | |||
199 | M | M.OtsIORF668P (97% identity) | M.OtsKatoORF199P | |
200 | ATP-binding protein | |||
246 | membrane protein | |||
247 | M | M.Ots76ORF1247P (98% identity) | M.OtsKatoORF247P | |
248 | Uncharacterised protein | |||
448 | ATP-binding protein | |||
??? | M | M.OtsKarpORF1643P (100% identity) | M.OtsKatoORF449P | |
450 | membrane protein | |||
524 | ankyrin repeat-containing protein | |||
525 | M | M.OtsKatoORF865P (99% identity) | M.OtsKatoORF525P | |
526 | membrane protein | |||
589 | Uncharacterised protein | |||
590 | M | M.OtsKatoORF865P (100% identity) | M.OtsKatoORF590P | |
591 | membrane protein | |||
725 | membrane protein | |||
726 | M | M.OtsKatoORF1435P (99% identity) | M.OtsKatoORF726P | |
727 | ATP-binding protein | |||
780 | ATP-binding protein | |||
781 | M | M.OtsKatoORF2149P (100% identity) | M.OtsKatoORF781P | |
782 | membrane protein | |||
793 | membrane protein | |||
??? | M | M.OtsKatoORF781P (98% identity) | M.OtsKatoORF794P | |
796 | ATP-binding protein | |||
864 | Uncharacterised protein | |||
865 | M | M.OtsKatoORF590P (100% identity) | M.OtsKatoORF865P | |
866 | membrane protein | |||
1196 | ATP-binding protein | |||
??? | M | M.OtsKatoORF449P (97% identity) | M.OtsKatoORF1197P | |
1199 | ankyrin | |||
1234 | membrane protein | |||
1235 | M | M.OtssGORF2245P (99% identity) | M.OtsKatoORF1235P | |
1236 | ATP-binding protein | |||
1434 | membrane protein | |||
1435 | M | M.OtsKatoORF726P (99% identity) | M.OtsKatoORF1435P | |
1436 | ATP-binding protein | |||
1464 | Uncharacterised protein | |||
1465 | M | M.OtsIORF441P (100% identity) | M.OtsKatoORF1465P | |
1466 | Uncharacterised protein | |||
1506 | membrane protein | |||
1507 | M | M.OtsKatoORF865P (100% identity) | M.OtsKatoORF1507P | |
1508 | Uncharacterised protein | |||
1648 | ATP-binding protein | |||
??? | M | M.OtsKarpORF827P (100% identity) | M.OtsKatoORF1649P | |
1650 | membrane protein | |||
1799 | membrane protein | |||
1800 | M | M.OtssGORF948P (100% identity) | M.OtsKatoORF1800P | |
1801 | ATP-binding protein | |||
2054 | ATP-binding protein | |||
??? | M | M.OtsIORF1933P (99% identity) | M.OtsKatoORF2055P | |
2056 | transposase | |||
2148 | ATP-binding protein | |||
2149 | M | M.OtsKatoORF781P (100% identity) | M.OtsKatoORF2149P | |
2150 | membrane protein | |||
2187 | ATP-binding protein | |||
2188 | M | M.OtsIORF1885P (99% identity) | M.OtsKatoORF2188P | |
2189 | membrane protein | |||
2287 | membrane protein | |||
2288 | M | M.Ots144ORF552P (97% identity) | M.OtsKatoORF2288P | |
2289 | ATP-binding protein | |||
chromosome I | ||||
10 | transposase | |||
??? | M | M.OtsUT76ORF3376P (100% identity) | M.Ots76ORF11P | |
12 | transposase | |||
34 | ATP-binding protein | |||
??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF35P | |
37 | membrane protein | |||
92 | ATP-binding protein | |||
93 | M | M.OtsUT76ORF2015P (100% identity) | M.Ots76ORF93P | |
94 | ATP-binding protein | |||
168 | membrane protein | |||
??? | M | M.OtsKatoORF31P (100% identity) | M.Ots76ORF169P | |
170 | ATP-binding protein | |||
194 | membrane protein | |||
195 | M | M.OtssGORF948P (99% identity) | M.Ots76ORF2074P | |
196 | ATP-binding protein | |||
221 | membrane protein | |||
222 | M | M.OtssGORF948P (97% identity) | M.Ots76ORF222P | |
223 | Uncharacterised protein | |||
238 | membrane protein | |||
??? | M | M.OtsKarpORF1538P (100% identity) | M.Ots76ORF239P | |
240 | ATP-binding protein | |||
299 | ATP-binding protein | |||
??? | M | M.OtsKatoORF31P (100% identity) | M.Ots76ORF300P | |
301 | membrane protein | |||
355 | membrane protein | |||
356 | M | M.Ots76ORF646P (99% identity) | M.Ots76ORF356P | |
357 | Uncharacterised protein | |||
645 | Uncharacterised protein | |||
646 | M | M.Ots76ORF356P (99% identity) | M.Ots76ORF646P | |
647 | membrane protein | |||
672 | Uncharacterised protein | |||
673 | M | M.OtsUT76ORF2369P (100% identity) | M.Ots76ORF673P | |
674 | membrane protein | |||
947 | ATP-binding protein | |||
??? | M | M.OtsKarpORF1538P (100% identity) | M.Ots76ORF948P | |
949 | membrane protein | |||
1024 | membrane protein | |||
??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1025P | |
1027 | ATP-binding protein | |||
1141 | ATP-binding protein | |||
??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1142P | |
1144 | membrane protein | |||
1178 | membrane protein | |||
1179 | M | M.OtsUT76ORF1552P (100% identity) | M.Ots76ORF1179P | |
1180 | ATP-binding protein | |||
1246 | membrane protein | |||
1247 | M | M.Ots763ORF2312P (77% identity) | M.Ots76ORF1247P | |
1248 | Uncharacterised protein | |||
1433 | membrane protein | |||
??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1434P | |
1436 | ATP-binding protein | |||
1534 | ATP-binding protein | |||
??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1535P | |
1537 | membrane protein | |||
1771 | ATP-binding protein | |||
??? | M | M.OtsUT76ORF3577P (100% identity) | M.Ots76ORF1772P | |
1774 | membrane protein | |||
2001 | transposase | |||
??? | M | M.OtsUT76ORF3376P (100% identity) | M.Ots76ORF2002P | |
2003 | transposase | |||
2182 | RNA-binding protein | |||
2183 | M | M.OtsUT76ORF2118P (100% identity) | M.Ots76ORF2183P | |
2184 | ATP-binding protein |