Yangia pacifica YSBP01 |
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Putative Yangia pacifica YSBP01 RM systems
Ref: Woo,J.-H. and Kim,H.-S. unpublished
REBASE ref # 26543
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,693,385 bp | CP022189 |
| chromosome 2: | 1,350,393 bp | CP022190 |
REBASE acronym: YpaBP01
Org_num: 29088
All begin CEW88_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 12810 | hemerythrin | |||
| 12815 | M | M.YspMM3ORF6850P (96% identity) | RGATCY | M.YpaBP01I |
| ??? | R | YspMM3ORF6850P (63% identity) | RGATCY | YpaBP01IP |
| 12830 | SAM-dependent methyltransferase | |||
| chromosome 2 | ||||
| 13090 | 147 aa hypothetical protein | |||
| ??? | R | RspPro17ORFJP (64% identity) | YpaBP01ORF13095P | |
| 13100 | IS110 family transposase | |||
| 14335 | cytochrome B | |||
| 14340 | M | M.YspMM3ORF5650P (96% identity) | GANTC | M.YpaBP01II |
| 14345 | ribonuclease HII | |||
| 15450 | 91 aa hypothetical protein | |||
| 15455 | M | M.TprJLTORF938P (66% identity) | M.YpaBP01ORF15455P | |
| 15460 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 11595 | 186 aa hypothetical protein | |||
| 11600 | M | M.EcoR15ORF21180P (72% identity) | M.YpaBP01ORF11600P | |
| 11605 | R | PinS45mORF2685P (83% identity) | YpaBP01ORF11600P | |
| 11610 | 233 aa hypothetical protein | |||