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Putative Clostridioides difficile CDT4 RM systems
Ref: Su,H. unpublished
REBASE ref # 26528
Sequence length: | GenBank #: | |
Chromosome: | 4,240,954 bp | CP029152 |
plasmid unnamed1: | 48,594 bp | CP029153 |
REBASE acronym: CdiT4
Org_num: 29047
All begin DDG61_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
16385 | DUF262 domain-containing protein | |||
16390 | R | PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | CdiT4ORF16415P |
16395 | 142 aa hypothetical protein | |||
16400 | nucleotidyltransferase domain-containing | |||
16405 | 102 aa hypothetical protein | |||
16410 | S | S.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | S.CdiT4ORF16415P |
16415 | M | M.PdiBJ08ORFBP (100% identity) | TAGNNNNNRTGAA | M.CdiT4ORF16415P |
16420 | ketose-bisphosphate aldolase | |||
16935 | 111 aa hypothetical protein | |||
16940 | R | PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | CdiT4ORF16965P |
16945 | 300 aa hypothetical protein | |||
16950 | 106 aa hypothetical protein | |||
16955 | 150 aa hypothetical protein | |||
16960 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.CdiT4ORF16965P |
16965 | M | M.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | M.CdiT4ORF16965P |
16970 | 159 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
15075 | patatin-like phospholipase family protein | |||
15080 | M | M.PdiBJ08ORFCP (100% identity) | CAAAAA | M.CdiT4ORF15080P |
15085 | Rrf2 family transcriptional regulator | |||
plasmid unnamed1 | ||||
19980 | CopY family transcriptional regulator | |||
19985 | M | M.CdiSHORF19525P (100% identity) | M.CdiT4ORF19985P | |
19990 | cell wall hydrolase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
11610 | AAA family ATPase | |||
11615 | R | PdiBJ08McrCP (100% identity) | CdiT4McrCP | |
11620 | R | PdiBJ08McrBP (100% identity) | CdiT4McrBP | |
11625 | cell division protein |