Escherichia coli 104 |
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Putative Escherichia coli 104 RM systems
Ref: Feng,Y. unpublished
REBASE ref # 26534
Complete sequence: 4,971,313 bp
GenBank #: CP029164
REBASE acronym: EcoF104
Org_num: 29056
All begin DDV95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 75 | restriction endonuclease | |||
| 80 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoF104ORF85P |
| 85 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoF104ORF85P |
| 90 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoF104ORF85P |
| 95 | endoribonuclease SymE | |||
| 9115 | 65 aa hypothetical protein | |||
| 9120 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoF104ORF9125P |
| 9125 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoF104ORF9125P |
| 9130 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoF104ORF9125P |
| 9135 | 540 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2160 | LexA family transcriptional regulator | |||
| 2165 | M | M.Eco5941BORFHP (100% identity) | GATC | M.EcoF104ORF2165P |
| 2170 | PerC family transcriptional regulator | |||
| 6570 | cell division protein DamX | |||
| 6575 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoF104DamP |
| 6580 | ribulose-phosphate 3-epimerase | |||
| 7200 | DUF2556 domain-containing protein | |||
| 7205 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.EcoF104ORF7205P |
| 7210 | Fis family transcriptional regulator | |||
| 14485 | phosphohydrolase | |||
| 14490 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoF104DcmP |
| 14495 | V | V.EcosEC7DcmP (100% identity) | V.EcoF104DcmP | |
| 14500 | EamA family transporter | |||
| 20965 | NinE family protein | |||
| 20970 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoF104ORF20970P |
| 20975 | recombination protein NinB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 70 | GTPase | |||
| 75 | R | EcosS1MrrP (100% identity) | EcoF104MrrP | |
| 80 | type I restriction-modification system | |||