Escherichia coli 2185 |
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Putative Escherichia coli 2185 RM systems
Ref: Baranzoni,G.M. et al. unpublished
REBASE ref # 25977
Contig set: 5,144,705 bp
GenBank #: NWBG00000000 (NZ_NWBG00000000)
REBASE acronym: Eco2185
Org_num: 28911
All begin COD28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4955 | 460 aa hypothetical protein | |||
| 4960 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco2185ORF4965P |
| 4965 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco2185ORF4965P |
| 4970 | R | SspZ54ORF5015P (99% identity) | TGANNNNNNCTTC | Eco2185ORF4965P |
| 4975 | ISL3 family transposase | |||
| 13370 | 50S ribosome-binding GTPase | |||
| 13375 | M | M.EcoEC521ORF29600P (100% identity) | M.Eco2185ORF13375P | |
| 13380 | S | S.EcoEC521ORF29600P (100% identity) | S.Eco2185ORF13375P | |
| 13385 | R | EcoEC521ORF29600P (100% identity) | Eco2185ORF13375P | |
| 13390 | 105 aa hypothetical protein | |||
| 24870 | 23 aa hypothetical protein | |||
| 24875 | S | S.Ecos15955ORF12100P (100% identity) | TGANNNNNNCTTC | S.Eco2185ORF24880P |
| 24880 | M | M.Ecos15955ORF12100P (100% identity) | TGANNNNNNCTTC | M.Eco2185ORF24880P |
| 24885 | R | Ecos15955ORF12100P (100% identity) | TGANNNNNNCTTC | Eco2185ORF24880P |
| 24890 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1915 | PerC family transcriptional regulator | |||
| 1920 | M | M.EcoS30ORF19345P (100% identity) | GATC | M.Eco2185ORF1920P |
| 1925 | LexA family transcriptional regulator | |||
| 1440 | DUF1281 domain-containing protein | |||
| 1445 | M | M.Ecocq9ORF29710P (100% identity) | M.Eco2185ORF1445P | |
| 1450 | 73 aa hypothetical protein | |||
| 1955 | 67 aa hypothetical protein | |||
| 1960 | M | M.Sso63633ORF22290P (100% identity) | M.Eco2185ORF1960P | |
| 1965 | lysis protein S | |||
| 7525 | transporter | |||
| 7530 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco2185ORF7530P |
| 7535 | Fis family transcriptional regulator | |||
| 5815 | 73 aa hypothetical protein | |||
| 5820 | M | M.StyR64ORFAP (100% identity) | M.Eco2185ORF5820P | |
| 5825 | 0 aa hypothetical protein | |||
| 3020 | integrase | |||
| 3025 | R | Sso8033ORF3755P (99% identity) | Eco2185ORF3030P | |
| 3030 | M | M.Sso8033ORF3755P (99% identity) | M.Eco2185ORF3030P | |
| 3035 | 257 aa hypothetical protein | |||
| 16395 | transcriptional regulator | |||
| 16400 | M | M.EcoCUVM3ORF9145P (99% identity) | M.Eco2185ORF16400P | |
| 16405 | serine/threonine protein phosphatase | |||
| 17110 | ribulose-phosphate 3-epimerase | |||
| 17115 | M | DNA adenine methylase | GATC | M.Eco2185DamP |
| 17120 | protein DamX | |||
| 19340 | EamA family transporter | |||
| 19345 | V | V.EcoP136DcmP (100% identity) | V.Eco2185DcmP | |
| 19350 | M | M.EcoP136DcmP (100% identity) | CCWGG | M.Eco2185DcmP |
| 19355 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24885 | type I restriction-modification system | |||
| 24890 | R | EcoP136MrrP (100% identity) | Eco2185MrrP | |
| 24895 | GTPase | |||