Hydrogenobacter thermophilus TK-6 (DOE JGI) |
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Putative Hydrogenobacter thermophilus TK-6 (DOE JGI) RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14316
Complete sequence: 1,742,932 bp
GenBank #: CP002221
REBASE acronym: HthTK6
Org_num: 6377
All begin Hydth_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15 | protein of unknown function DUF45 | |||
| 16 | R | HthTKORF19P (100% identity) | HthTK6ORF20P | |
| 17 | 41 aa conserved hypothetical protein | |||
| 18 | DNA polymerase beta domain protein region | |||
| 19 | S | S.HthTKORF19P (100% identity) | S.HthTK6ORF20P | |
| 20 | M | M.HthTKORF19P (100% identity) | M.HthTK6ORF20P | |
| 21 | ATPase associated with various cellular | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 220 | signal recognition particle protein | |||
| 221 | R | 203 aa conserved hypothetical protein | CCGG | HthTK6ORF222P |
| 222 | M | M.HthTKORF223P (100% identity) | CCGG | M.HthTK6ORF222P |
| 223 | thioredoxin reductase | |||
| 284 | helicase domain protein | |||
| 285 | RM | HthTKORF288P (100% identity) | HthTK6ORF285P | |
| 286 | 31 aa hypothetical protein | |||
| 966 | 150 aa hypothetical protein | |||
| ??? | M | M.HthTKORF971P (100% identity) | CGCG | M.HthTK6ORFAP |
| 968 | 104 aa hypothetical protein DICTH_0254 | |||
| 1652 | dihydropteroate synthase | |||
| 1653 | M | M.HthTKORF1668P (100% identity) | GATC | M.HthTK6ORF1653P |
| 1654 | DNA mismatch repair protein | |||
| 1881 | Sporulation domain protein | |||
| 1882 | M | M.UaqJFFORF19P (100% identity) | M.HthTK6ORF1882P | |
| 1883 | protein of unknown function DUF82 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1603 | ferric uptake regulator, Fur family | |||
| 1604 | M | M.HthTKORF1616P (100% identity) | M.HthTK6ORF1604P | |
| 1605 | R | HthTKORF1616P (100% identity) | HthTK6ORF1604P | |
| 1606 | peptidase M16 domain protein | |||