Vibrio cholerae N16961 |
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Putative Vibrio cholerae N16961 RM systems
Ref: Matthey,N. et al. unpublished
REBASE ref # 26479
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,975,504 bp | CP028827 |
| chromosome 2: | 1,072,331 bp | CP028828 |
REBASE acronym: Vch16961
Org_num: 28940
All begin N16961_VC, N16961_VCA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1103 | 687 aa hypothetical protein | |||
| 1104 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch16961ORF1104P |
| 1105 | S | S.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | S.Vch16961ORF1104P |
| 1106 | 470 aa hypothetical protein | |||
| 1107 | 663 aa hypothetical protein | |||
| 1108 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | Vch16961ORF1104P |
| 1109 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 269 | Cell division protein DamX | |||
| 270 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch16961DamP |
| 271 | Ribulose-phosphate 3-epimerase | |||
| chromosome 2 | ||||
| 2918 | GMP reductase | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch16961ORF2919P |
| 2920 | 638 aa hypothetical protein | |||
| 3116 | 63 aa hypothetical protein | |||
| 3117 | M | M.VspNIH41ORF3529P (94% identity) | M.Vch16961ORF3117P | |
| 3118 | 141 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2026 | Tellurite methyltransferase | |||
| 2027 | R | VchsMO10ORF9915P (100% identity) | Vch16961ORF2027P | |
| 2028 | hypothetical protein | |||